RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 MTERF2Q49AM1 385 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 CDKL2Q92772 493 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 FAM149B1Q96BN6 582 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 FANCLQ9NW38 375 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 NR2F2P24468 414 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 LCORLQ8N3X6 602 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 TBCKQ8TEA7 893 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 PI4KBQ9UBF8 816 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 SGK1O00141 431 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 MEIS1O00470 390 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 COA7Q96BR5 231 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 CUEDC2Q9H467 287 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 CFAP65Q6ZU64 1925 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 SOS2Q07890 1332 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 ADD2P35612 726 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 TFAMQ00059 246 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 TSNAXIP1Q2TAA8 658 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 HOMEZQ8IX15 550 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 BBOF1Q8ND07 529 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 FAM114A2Q9NRY5 505 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 MESDQ14696 234 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 CHMP6Q96FZ7 201 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 MTMR6Q9Y217 621 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 CEP170Q5SW79 1584 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 DISP1Q96F81 1524 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 PSAPP07602 524 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 YWHAGP61981 247 aaKnown RBP eCLIP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 PHLDB2Q86SQ0 1253 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 MICAL1Q8TDZ2 1067 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 ARHGAP42A6NI28 874 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 PRKAB2O43741 272 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 SLC4A1P02730 911 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 COPB1P53618 953 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 ARHGEF25Q86VW2 580 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 SEPT12Q8IYM1 358 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 SMYD2Q9NRG4 433 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 PTPN22Q9Y2R2 807 aa15.22■□□□□ 0.03
RAPGEF3-205ENST00000449771 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 AFPP02771 609 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 MYL3P08590 195 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 ANXA13P27216 316 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 OSTNP61366 133 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 JADE1Q6IE81 842 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 PPP2R2CQ9Y2T4 447 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 ANGPTL3Q9Y5C1 460 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 CAPN7Q9Y6W3 813 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 LRRC41Q15345 812 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 RAPH1Q70E73 1250 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 DYNLL2Q96FJ2 89 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 CPSF3Q9UKF6 684 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 PPFIA4O75335 1185 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 TRAPPC10P48553 1259 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 RASSF7Q02833 373 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 GRAPQ13588 217 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 FAM186BQ8IYM0 893 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 AK8Q96MA6 479 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 LSG1Q9H089 658 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 MYO1FO00160 1098 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 CLIC2O15247 247 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 GCFC2P16383 781 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 UHMK1Q8TAS1 419 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 TMEM206Q9H813 350 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 IFT122Q9HBG6 1241 aa15.21■□□□□ 0.03
RAPGEF3-205ENST00000449771 UBN2Q6ZU65 1347 aa15.21■□□□□ 0.02
RAPGEF3-205ENST00000449771 PASKQ96RG2 1323 aa15.21■□□□□ 0.02
RAPGEF3-205ENST00000449771 NAA35Q5VZE5 725 aa15.21■□□□□ 0.02
RAPGEF3-205ENST00000449771 NLRP10Q86W26 655 aa15.21■□□□□ 0.02
RAPGEF3-205ENST00000449771 DCLK2Q8N568 766 aa15.21■□□□□ 0.02
RAPGEF3-205ENST00000449771 C7orf31Q8N865 590 aa15.21■□□□□ 0.02
RAPGEF3-205ENST00000449771 TRIM11Q96F44 468 aa15.21■□□□□ 0.02
RAPGEF3-205ENST00000449771 ZNF233A6NK53 670 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 HEXIM1O94992 359 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 TTLL6Q8N841 843 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 GPR101Q96P66 508 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 NCAPGQ9BPX3 1015 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 METP08581 1390 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 UGGT1Q9NYU2 1555 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 FRMD3A2A2Y4 597 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 MARK3P27448 753 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 SNAP25P60880 206 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 MYO1EQ12965 1108 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 KSR1Q8IVT5 923 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 CCNYQ8ND76 341 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
RAPGEF3-205ENST00000449771 ANTXR1Q9H6X2 564 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms