RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 GAP43P17677 238 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 PSMD2Q13200 908 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
CTC1-202ENST00000449476 IL25Q9H293 177 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 CPVLQ9H3G5 476 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 AS3MTQ9HBK9 375 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 SH3GLB2Q9NR46 395 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 SSX2IPQ9Y2D8 614 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 JRKLQ9Y4A0 524 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 PABPN1LA6NDY0 278 aaKnown RBP11.38□□□□□ -0.59
CTC1-202ENST00000449476 NMT2O60551 498 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 PLA2G4BP0C869 781 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 LMNB1P20700 586 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 MYL7Q01449 175 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 DMP1Q13316 513 aaPredicted RBP11.38□□□□□ -0.59
CTC1-202ENST00000449476 RASA3Q14644 834 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 AOC3Q16853 763 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 KCTD16Q68DU8 428 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 FAM133AQ8N9E0 248 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 POMGNT1Q8WZA1 660 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 TMEM47Q9BQJ4 181 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 WDR11Q9BZH6 1224 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 HOMER3Q9NSC5 361 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 PI4KBQ9UBF8 816 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 RIPOR2Q9Y4F9 1068 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 SORBS3O60504 671 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 PRPF6O94906 941 aaKnown RBP11.38□□□□□ -0.59
CTC1-202ENST00000449476 HEXIM1O94992 359 aaKnown RBP11.38□□□□□ -0.59
CTC1-202ENST00000449476 CCDC89Q8N998 374 aa11.38□□□□□ -0.59
CTC1-202ENST00000449476 PNMA6FA0A0J9YX94 578 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 KIF28PB7ZC32 967 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 H0YCG3 227 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 DAPK3O43293 454 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 TRIM37O94972 964 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 ADCY8P40145 1251 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 LRRC63Q05C16 580 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 MESDQ14696 234 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 DCAF15Q66K64 600 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 SHC4Q6S5L8 630 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 MLXIPQ9HAP2 919 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 EPB41L5Q9HCM4 733 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 MOCS3O95396 460 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 STX2P32856 288 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 APBA1Q02410 837 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 SEPT2Q15019 361 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 PPFIBP2Q8ND30 876 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 ZNF408Q9H9D4 720 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 TRPC5Q9UL62 973 aaPredicted RBP11.37□□□□□ -0.59
CTC1-202ENST00000449476 ZNF609O15014 1411 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 CPS1P31327 1500 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 CPDO75976 1380 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 FTCDO95954 541 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 KIF11P52732 1056 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 RSRC1Q96IZ7 334 aaKnown RBP11.37□□□□□ -0.59
CTC1-202ENST00000449476 NACC1Q96RE7 527 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 SUGCTQ9HAC7 445 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 PTPRUQ92729 1446 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 LRRIQ4A6NIV6 560 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 HNRNPDLO14979 420 aaKnown RBP11.37□□□□□ -0.59
CTC1-202ENST00000449476 EPHB4P54760 987 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 YWHAEP62258 255 aaKnown RBP11.37□□□□□ -0.59
CTC1-202ENST00000449476 ATP11AP98196 1134 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 BRDTQ58F21 947 aaPredicted RBP11.37□□□□□ -0.59
CTC1-202ENST00000449476 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 STMN2Q93045 179 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
CTC1-202ENST00000449476 LRRN2O75325 713 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 CACNA2D3Q8IZS8 1091 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 MAGOHBQ96A72 148 aaKnown RBP11.36□□□□□ -0.59
CTC1-202ENST00000449476 NT5C1BQ96P26 610 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 NARFQ9UHQ1 456 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 TRIM49BA6NDI0 452 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 NDC80O14777 642 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 ATF7P17544 494 aaPredicted RBP11.36□□□□□ -0.59
CTC1-202ENST00000449476 ITIH3Q06033 890 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 C2orf54Q08AI8 447 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 CDC37Q16543 378 aaPredicted RBP11.36□□□□□ -0.59
CTC1-202ENST00000449476 LGSNQ5TDP6 509 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 RNF34Q969K3 372 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 RAB20Q9NX57 234 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 RNF40O75150 1001 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 NSFP46459 744 aaKnown RBP11.36□□□□□ -0.59
CTC1-202ENST00000449476 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
CTC1-202ENST00000449476 GRK7Q8WTQ7 553 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
CTC1-202ENST00000449476 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 ADAMTS1Q9UHI8 967 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 TRPC6Q9Y210 931 aa11.36□□□□□ -0.59
CTC1-202ENST00000449476 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms