RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 EPSTI1Q96J88 318 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 AFF2P51816 1311 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 ASNSP08243 561 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 RASGRF1Q13972 1273 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 Q3C1V9 767 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 VSIG1Q86XK7 387 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 FAM186BQ8IYM0 893 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 PGBD1Q96JS3 809 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 CCDC68Q9H2F9 335 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 NOC2LQ9Y3T9 749 aaKnown RBP11.13□□□□□ -0.63
SCN10A-201ENST00000449082 AFPP02771 609 aaKnown RBP11.12□□□□□ -0.63
SCN10A-201ENST00000449082 ADRA2BP18089 450 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 HOXA7P31268 230 aaPredicted RBP11.12□□□□□ -0.63
SCN10A-201ENST00000449082 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 C2orf69Q8N8R5 385 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 MCUR1Q96AQ8 359 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 TUBGCP2Q9BSJ2 902 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 ADGRL3Q9HAR2 1447 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 SYNJ2BP-COX16A0A087WUM0 186 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 TCP1P17987 556 aaKnown RBP11.12□□□□□ -0.63
SCN10A-201ENST00000449082 ELF2Q15723 593 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
SCN10A-201ENST00000449082 COX16Q9P0S2 106 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 THAP12O43422 761 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 RSRC2Q7L4I2 434 aaKnown RBP11.12□□□□□ -0.63
SCN10A-201ENST00000449082 PI4K2BQ8TCG2 481 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF341Q9BYN7 854 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 ATP8B3O60423 1300 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 RGS16O15492 202 aaPredicted RBP11.12□□□□□ -0.63
SCN10A-201ENST00000449082 SEPT2Q15019 361 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 KIAA1841Q6NSI8 718 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 PPP4R1Q8TF05 950 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 RUNDC3BQ96NL0 473 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 PIH1D3Q9NQM4 214 aaKnown RBP11.12□□□□□ -0.63
SCN10A-201ENST00000449082 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF233A6NK53 670 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 IFNAR1P17181 557 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 MTERF2Q49AM1 385 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 P2RX5Q93086 422 aa11.12□□□□□ -0.63
SCN10A-201ENST00000449082 MYO1FO00160 1098 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
SCN10A-201ENST00000449082 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
SCN10A-201ENST00000449082 SURF1Q15526 300 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 CRKP46108 304 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 RPS6KA2Q15349 733 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
SCN10A-201ENST00000449082 TSC1Q92574 1164 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 BRIP1Q9BX63 1249 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 SLC12A6Q9UHW9 1150 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 PPP2R2CQ9Y2T4 447 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 EIF3CLB5ME19 914 aaKnown RBP11.11□□□□□ -0.63
SCN10A-201ENST00000449082 H7C0C1 242 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 MED7O43513 233 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 ATP5OP48047 213 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 CACNA2D3Q8IZS8 1091 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 GPATCH11Q8N954 259 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 EIF3CQ99613 913 aaKnown RBP11.11□□□□□ -0.63
SCN10A-201ENST00000449082 CHD1O14646 1710 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 ARHGAP31Q2M1Z3 1444 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 ABCC3O15438 1527 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 ATF2P15336 505 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF658Q5TYW1 1059 aaPredicted RBP11.11□□□□□ -0.63
SCN10A-201ENST00000449082 ANKRD20A3Q5VUR7 823 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 KAZNQ674X7 775 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 RILPQ96NA2 401 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 CTNNA1P35221 906 aaKnown RBP11.11□□□□□ -0.63
SCN10A-201ENST00000449082 MYO1EQ12965 1108 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF148Q9UQR1 794 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 OVOS2A0A0J9YW53 1432 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 OVOS2Q6IE36 1432 aa11.11□□□□□ -0.63
SCN10A-201ENST00000449082 LIFRP42702 1097 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 LMNB2Q03252 620 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 HLFQ16534 295 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 DESI2Q9BSY9 194 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 PCDHA5Q9Y5H7 936 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 EPN1Q9Y6I3 576 aaPredicted RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 XPAP23025 273 aaPredicted RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 STX2P32856 288 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 TFAMQ00059 246 aaKnown RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 KIF23Q02241 960 aaPredicted RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 ALCAMQ13740 583 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 C4orf50Q6ZRC1 276 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 RNF207Q6ZRF8 634 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 RPUSD2Q8IZ73 545 aaKnown RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 ARHGEF2Q92974 986 aaKnown RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 GPR101Q96P66 508 aaPredicted RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 PARVGQ9HBI0 331 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 COL15A1P39059 1388 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 MEIS1O00470 390 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 TROVE2P10155 538 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 GBP1P32455 592 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms