RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 KLC4Q9NSK0 619 aa22.61■■□□□ 1.21
SMARCD2-203ENST00000448276 PLCH1Q4KWH8 1693 aa22.61■■□□□ 1.21
SMARCD2-203ENST00000448276 M0R2N6 131 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 DDX42Q86XP3 938 aaKnown RBP eCLIP22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 DNAAF5Q86Y56 855 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 GOLPH3Q9H4A6 298 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 JAG2Q9Y219 1238 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 CCNT1O60563 726 aaKnown RBP22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 ATP2C2O75185 946 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 FGRP09769 529 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 TMOD1P28289 359 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 ASTE1Q2TB18 679 aaPredicted RBP22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 CCDC40Q4G0X9 1142 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 HGSNATQ68CP4 663 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 VCPKMTQ9H867 229 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 TCP11L1Q9NUJ3 509 aa22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 BCCIPQ9P287 314 aaKnown RBP eCLIP22.6■■□□□ 1.21
SMARCD2-203ENST00000448276 MICALCLQ6ZW33 695 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 CCDC47Q96A33 483 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 PACSIN1Q9BY11 444 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 PJA2O43164 708 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 GOLGA8HP0CJ92 632 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 KLRC1P26715 233 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 HLTFQ14527 1009 aaKnown RBP eCLIP22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 QPCTQ16769 361 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 PDXDC1Q6P996 788 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 SLC40A1Q9NP59 571 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 MYL1P05976 194 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 GLE1Q53GS7 698 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 EP400NLQ6ZTU2 488 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 C7orf25Q9BPX7 421 aa22.59■■□□□ 1.21
SMARCD2-203ENST00000448276 PDHBP11177 359 aa22.58■■□□□ 1.21
SMARCD2-203ENST00000448276 SF3A3Q12874 501 aaKnown RBP eCLIP22.58■■□□□ 1.216e-6■□□□□ 10.9
SMARCD2-203ENST00000448276 CYFIP2Q96F07 1278 aa22.58■■□□□ 1.21
SMARCD2-203ENST00000448276 DCP1AQ9NPI6 582 aaPredicted RBP22.58■■□□□ 1.21
SMARCD2-203ENST00000448276 ARAP2Q8WZ64 1704 aa22.58■■□□□ 1.21
SMARCD2-203ENST00000448276 ATXN2Q99700 1313 aaKnown RBP22.58■■□□□ 1.21
SMARCD2-203ENST00000448276 A6NNZ2 444 aa22.58■■□□□ 1.2
SMARCD2-203ENST00000448276 CYTH3O43739 400 aa22.58■■□□□ 1.2
SMARCD2-203ENST00000448276 TLR2O60603 784 aa22.58■■□□□ 1.2
SMARCD2-203ENST00000448276 CCDC172P0C7W6 258 aa22.58■■□□□ 1.2
SMARCD2-203ENST00000448276 TUBB8Q3ZCM7 444 aa22.58■■□□□ 1.2
SMARCD2-203ENST00000448276 CENPPQ6IPU0 288 aa22.58■■□□□ 1.2
SMARCD2-203ENST00000448276 MMTAG2Q9BU76 263 aaKnown RBP22.58■■□□□ 1.2
SMARCD2-203ENST00000448276 FAM107AO95990 144 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 DDR1Q08345 913 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 KCNMA1Q12791 1236 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 MAN2A1Q16706 1144 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 TEX2Q8IWB9 1127 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 KIF5BP33176 963 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 PNMA1Q8ND90 353 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 IL17RBQ9NRM6 502 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 COL4A1P02462 1669 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 TOGARAM1Q9Y4F4 1720 aa22.57■■□□□ 1.2
SMARCD2-203ENST00000448276 MYMKA6NI61 221 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 TFAP4Q01664 338 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 CNNM4Q6P4Q7 775 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 SPATS2Q86XZ4 545 aaKnown RBP22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 DYNLL2Q96FJ2 89 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 CCDC114Q96M63 670 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 SUFUQ9UMX1 484 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 A0A0G2JS52 829 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 USP17L3A6NCW0 530 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 USP17L4A6NCW7 530 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 DNM1LO00429 736 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 RASSF9O75901 435 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 OR52Z1P0C646 297 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 USP17L8P0C7I0 530 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 PSEN1P49768 467 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 ERVK-9P63128 1117 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 USP17L1Q7RTZ2 530 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 TBC1D5Q92609 795 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 TMBIM4Q9HC24 238 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 LRRC4CQ9HCJ2 640 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 DDX20Q9UHI6 824 aaKnown RBP22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 LRP5O75197 1615 aa22.56■■□□□ 1.2
SMARCD2-203ENST00000448276 ORC4O43929 436 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 RDXP35241 583 aaKnown RBP22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 HSD17B3P37058 310 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 CDC37Q16543 378 aaPredicted RBP22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 CHADLQ6NUI6 762 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 YTHDF3Q7Z739 585 aaKnown RBP22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 CEP57Q86XR8 500 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 CD302Q8IX05 232 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 FAM212AQ96EL1 285 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 KLRK1P26718 216 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 SMTNP53814 917 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 UAP1Q16222 522 aaPredicted RBP22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 CCDC152Q4G0S7 254 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 C6orf89Q6UWU4 347 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 NEUROG2Q9H2A3 272 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 MAD2L2Q9UI95 211 aa22.55■■□□□ 1.2
SMARCD2-203ENST00000448276 STRCQ7RTU9 1775 aa22.54■■□□□ 1.2
SMARCD2-203ENST00000448276 HMGB1P1B2RPK0 211 aaPredicted RBP22.54■■□□□ 1.2
SMARCD2-203ENST00000448276 STXBP3O00186 592 aa22.54■■□□□ 1.2
SMARCD2-203ENST00000448276 CHUKO15111 745 aa22.54■■□□□ 1.2
SMARCD2-203ENST00000448276 FLT3P36888 993 aa22.54■■□□□ 1.2
SMARCD2-203ENST00000448276 TXKP42681 527 aa22.54■■□□□ 1.2
SMARCD2-203ENST00000448276 MREGQ8N565 214 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms