RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MYO1AQ9UBC5 1043 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 UBE4BO95155 1302 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 SGK1O00141 431 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 CFLARO15519 480 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 HSPA9P38646 679 aaKnown RBP9.64□□□□□ -0.87
NIPBL-202ENST00000448238 MRPS35P82673 323 aaKnown RBP9.64□□□□□ -0.87
NIPBL-202ENST00000448238 AOC3Q16853 763 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 MTERF3Q96E29 417 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 EHD2Q9NZN4 543 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 MAP3K15Q6ZN16 1313 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 GNPTABQ3T906 1256 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 KRT39Q6A163 491 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 SPOPLQ6IQ16 392 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 SH3BP5LQ7L8J4 393 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 MAML1Q92585 1016 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 PPP1R14AQ96A00 147 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 USE1Q9NZ43 259 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 RGL1Q9NZL6 768 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 PCDHGB4Q9UN71 923 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 TARSL2A2RTX5 802 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 NR1H3Q13133 447 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 IMPG1Q17R60 797 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 ELMSAN1Q6PJG2 1045 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 CDC37L1Q7L3B6 337 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SYT2Q8N9I0 419 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 MRPL48Q96GC5 212 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 CYTH2Q99418 400 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 LSG1Q9H089 658 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 EPS8L2Q9H6S3 715 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 C1orf112Q9NSG2 853 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 CHMP2BQ9UQN3 213 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 KDM3AQ9Y4C1 1321 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 TBC1D4O60343 1298 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 UBE3AQ05086 875 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SNX30Q5VWJ9 437 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 EXOC4Q96A65 974 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 NT5C3AQ9H0P0 336 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 MT-ND3P03897 115 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SP100P23497 879 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 PSMC6P62333 389 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 KRT17Q04695 432 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 PPIDQ08752 370 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 OR8K1Q8NGG5 319 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 FKBP14Q9NWM8 211 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 IVNS1ABPQ9Y6Y0 642 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 ZNF839A8K0R7 811 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 MYO1DO94832 1006 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 EPHB4P54760 987 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 NRG3P56975 720 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 HIBCHQ6NVY1 386 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SLC30A9Q6PML9 568 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 C2CD5Q86YS7 1000 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 KIRREL3Q8IZU9 778 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 ZBTB9Q96C00 473 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 TBC1D32Q96NH3 1257 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 PSMB7Q99436 277 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 CCDC8Q9H0W5 538 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 WDR64B1ANS9 1081 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 TOM1L1O75674 476 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 NFRKBQ6P4R8 1299 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 ZNF804AQ7Z570 1209 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 MDM1Q8TC05 714 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 CASP10Q92851 521 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 H2AFY2Q9P0M6 372 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 H7C0C1 242 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 M0R3G1 203 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 PARP1P09874 1014 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 ATP5OP48047 213 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SERPINB4P48594 390 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 CLK1P49759 484 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 ATN1P54259 1190 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SESN2P58004 480 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SCYL2Q6P3W7 929 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 Q6ZUG5 572 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 PRPF18Q99633 342 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 INTUQ9ULD6 942 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 FAM32AQ9Y421 112 aaKnown RBP9.63□□□□□ -0.87
NIPBL-202ENST00000448238 LCA5LO95447 670 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 ABCD1P33897 745 aa9.63□□□□□ -0.87
NIPBL-202ENST00000448238 SERPINH1P50454 418 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 FANCCQ00597 558 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 MAPRE2Q15555 327 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 C1orf146Q5VVC0 180 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 BTNL9Q6UXG8 535 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 RFT1Q96AA3 541 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 ZNF496Q96IT1 587 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 ATPIF1Q9UII2 106 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CCNT1O60563 726 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 S100A1P23297 94 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 TMC5Q6UXY8 1006 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 ADPGKQ9BRR6 497 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 DRP2Q13474 957 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.876e-6■■□□□ 13.1
NIPBL-202ENST00000448238 PPP2R5BQ15173 497 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 TERB1Q8NA31 727 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CDC26Q8NHZ8 85 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 SNX21Q969T3 373 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 MMTAG2Q9BU76 263 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms