RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 SYF2O95926 243 aaKnown RBP14.32□□□□□ -0.12
SHC1-210ENST00000448116 IQCEQ6IPM2 695 aa14.32□□□□□ -0.12
SHC1-210ENST00000448116 TRIM58Q8NG06 486 aa14.32□□□□□ -0.12
SHC1-210ENST00000448116 ARHGEF1Q92888 912 aaKnown RBP14.32□□□□□ -0.12
SHC1-210ENST00000448116 RPGRIP1Q96KN7 1286 aa14.32□□□□□ -0.12
SHC1-210ENST00000448116 ZHX3Q9H4I2 956 aa14.32□□□□□ -0.12
SHC1-210ENST00000448116 BLOC1S4Q9NUP1 217 aa14.32□□□□□ -0.12
SHC1-210ENST00000448116 RRP15Q9Y3B9 282 aaKnown RBP14.32□□□□□ -0.12
SHC1-210ENST00000448116 SPATA31A5Q5VU36 1347 aa14.32□□□□□ -0.12
SHC1-210ENST00000448116 SPATA31A7Q8IWB4 1347 aa14.32□□□□□ -0.12
SHC1-210ENST00000448116 A0A1B0GUL6 1792 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 RASSF7Q02833 373 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 UBE2SQ16763 222 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 KRT79Q5XKE5 535 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 TSGA10Q9BZW7 698 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 SNX12Q9UMY4 172 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 JRKLQ9Y4A0 524 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 PHLPP1O60346 1717 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 IVLP07476 585 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 RFC4P35249 363 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 CCDC40Q4G0X9 1142 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 CENPPQ6IPU0 288 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.31□□□□□ -0.12
SHC1-210ENST00000448116 DDX12PQ92771 950 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 DMGDHQ9UI17 866 aaKnown RBP14.31□□□□□ -0.12
SHC1-210ENST00000448116 PLAGL2Q9UPG8 496 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 ANO9A1A5B4 782 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 TRAF5O00463 557 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
SHC1-210ENST00000448116 MAN2A1Q16706 1144 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 DNAJC21Q5F1R6 531 aaKnown RBP14.31□□□□□ -0.12
SHC1-210ENST00000448116 TMC4Q7Z404 712 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 NELFCDQ8IXH7 590 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 PNMA5Q96PV4 448 aa14.31□□□□□ -0.12
SHC1-210ENST00000448116 RTFDC1Q9BY42 306 aaPredicted RBP14.31□□□□□ -0.12
SHC1-210ENST00000448116 CCNL1Q9UK58 526 aaPredicted RBP14.31□□□□□ -0.12
SHC1-210ENST00000448116 COL14A1Q05707 1796 aaKnown RBP14.31□□□□□ -0.12
SHC1-210ENST00000448116 PPP1R2P41236 205 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 ADCY7P51828 1080 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 RNASE9P60153 205 aaKnown RBP14.3□□□□□ -0.12
SHC1-210ENST00000448116 PPP4CP60510 307 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
SHC1-210ENST00000448116 UNC13DQ70J99 1090 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 KCNK18Q7Z418 384 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 ALS2CR12Q96Q35 445 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 LEMD3Q9Y2U8 911 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 GOLGA6BA6NDN3 693 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 MFSD14BQ5SR56 506 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 CREG2Q8IUH2 290 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 ZSCAN29Q8IWY8 852 aaPredicted RBP14.3□□□□□ -0.12
SHC1-210ENST00000448116 TSG101Q99816 390 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
SHC1-210ENST00000448116 FGFR1OPO95684 399 aaKnown RBP14.29□□□□□ -0.12
SHC1-210ENST00000448116 PAFAH1B1P43034 410 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 GRAPQ13588 217 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 LRRC31Q6UY01 552 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 CCDC84Q86UT8 332 aaPredicted RBP14.29□□□□□ -0.12
SHC1-210ENST00000448116 GRAPLQ8TC17 118 aaPredicted RBP14.29□□□□□ -0.12
SHC1-210ENST00000448116 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 SIK3Q9Y2K2 1263 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 TARSL2A2RTX5 802 aaKnown RBP14.29□□□□□ -0.12
SHC1-210ENST00000448116 C16orf86Q6ZW13 317 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 MSL3Q8N5Y2 521 aaKnown RBP14.29□□□□□ -0.12
SHC1-210ENST00000448116 SPATA4Q8NEY3 305 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
SHC1-210ENST00000448116 OSBPL9Q96SU4 736 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
SHC1-210ENST00000448116 RASSF4Q9H2L5 321 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 PRDM16Q9HAZ2 1276 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 CD209Q9NNX6 404 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 SLC16A2P36021 539 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 GPSM2P81274 684 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 APBA1Q02410 837 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 SRLQ86TD4 932 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 VIPAS39Q9H9C1 493 aa14.29□□□□□ -0.12
SHC1-210ENST00000448116 A0A1W2PQJ5 194 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 SLC1A4P43007 532 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 FNBP4Q8N3X1 1017 aaPredicted RBP14.28□□□□□ -0.12
SHC1-210ENST00000448116 CNBD1Q8NA66 436 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 MS4A14Q96JA4 679 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 C6orf229H3BNL8 230 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 TTC19Q6DKK2 380 aaPredicted RBP14.28□□□□□ -0.12
SHC1-210ENST00000448116 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 SALL4Q9UJQ4 1053 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 CNTNAP4Q9C0A0 1308 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 GOLGA6CA6NDK9 693 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 GOLGA6DP0CG33 693 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 FIGNQ5HY92 759 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
SHC1-210ENST00000448116 ZNF662Q6ZS27 426 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 GUF1Q8N442 669 aaKnown RBP14.28□□□□□ -0.12
SHC1-210ENST00000448116 RAD54LQ92698 747 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 PURBQ96QR8 312 aaKnown RBP14.28□□□□□ -0.12
SHC1-210ENST00000448116 GOLGA6AQ9NYA3 693 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 STK17AQ9UEE5 414 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 HYOU1Q9Y4L1 999 aa14.28□□□□□ -0.12
SHC1-210ENST00000448116 PVALEFA0A1B0GWK0 134 aa14.27□□□□□ -0.12
SHC1-210ENST00000448116 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms