RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 PDCD2LQ9BRP1 358 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 SLC26A6Q9BXS9 759 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 PDGFCQ9NRA1 345 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 ZHX1Q9UKY1 873 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-207ENST00000447641 CPLX1O14810 134 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 DUSP11O75319 330 aaKnown RBP16.23■□□□□ 0.19
SREBF1-207ENST00000447641 NAPAP54920 295 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 ST3GAL1Q11201 340 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 PGM5Q15124 567 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
SREBF1-207ENST00000447641 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 FBXO16Q8IX29 292 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-207ENST00000447641 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 NECAB1Q8N987 351 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 CUL5Q93034 780 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 FAM161BQ96MY7 647 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 ZMYND12Q9H0C1 365 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
SREBF1-207ENST00000447641 GNEQ9Y223 722 aaKnown RBP16.23■□□□□ 0.19
SREBF1-207ENST00000447641 REV3LO60673 3130 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 SMCO2A6NFE2 343 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 PPFIA3O75145 1194 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 EIF3JO75822 258 aaKnown RBP16.22■□□□□ 0.19
SREBF1-207ENST00000447641 CDKL5O76039 1030 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 DEXIO95424 95 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 RARBP10826 455 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
SREBF1-207ENST00000447641 ADCYAP1R1P41586 468 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 CLK2P49760 499 aaKnown RBP16.22■□□□□ 0.19
SREBF1-207ENST00000447641 AKAP17AQ02040 695 aaKnown RBP16.22■□□□□ 0.19
SREBF1-207ENST00000447641 TNFAIP2Q03169 654 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 STXBP2Q15833 593 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 FAM109BQ6ICB4 259 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-207ENST00000447641 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-207ENST00000447641 IL31RAQ8NI17 732 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 SMARCC2Q8TAQ2 1214 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 GLT8D2Q9H1C3 349 aa16.22■□□□□ 0.19
SREBF1-207ENST00000447641 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
SREBF1-207ENST00000447641 STK36Q9NRP7 1315 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-207ENST00000447641 CTAGE5O15320 804 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 ADAMTS4O75173 837 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 RGS20O76081 388 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 SMPD1P17405 629 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 ADCY7P51828 1080 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 UBE2SQ16763 222 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 TMEM63BQ5T3F8 832 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 XRRA1Q6P2D8 792 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 CCDC62Q6P9F0 684 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
SREBF1-207ENST00000447641 ARRDC4Q8NCT1 418 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 KLHDC9Q8NEP7 349 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 LENG1Q96BZ8 264 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-207ENST00000447641 ZSCAN31Q96LW9 406 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-207ENST00000447641 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
SREBF1-207ENST00000447641 XPNPEP3Q9NQH7 507 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 Q9Y3F1 56 aa16.21■□□□□ 0.19
SREBF1-207ENST00000447641 DNM1LO00429 736 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 ADAMTS3O15072 1205 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 FDPSP14324 419 aaKnown RBP16.2■□□□□ 0.18
SREBF1-207ENST00000447641 GJA9P57773 515 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 MRPS9P82933 396 aaKnown RBP16.2■□□□□ 0.18
SREBF1-207ENST00000447641 LRRC41Q15345 812 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 PCNX4Q63HM2 1172 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-207ENST00000447641 NSUN7Q8NE18 718 aaKnown RBP16.2■□□□□ 0.18
SREBF1-207ENST00000447641 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 CCDC12Q8WUD4 166 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-207ENST00000447641 WDR11Q9BZH6 1224 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 SH2B1Q9NRF2 756 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-207ENST00000447641 PCDHA6Q9UN73 950 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 PCDHA8Q9Y5H6 950 aa16.2■□□□□ 0.18
SREBF1-207ENST00000447641 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 STAM2O75886 525 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 PGK1P00558 417 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 FOSP01100 380 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-207ENST00000447641 CST5P28325 142 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-207ENST00000447641 CCND2P30279 289 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 NPY5RQ15761 445 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 SENP6Q9GZR1 1112 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-207ENST00000447641 VPS54Q9P1Q0 977 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 CHD9Q3L8U1 2897 aa16.19■□□□□ 0.18
SREBF1-207ENST00000447641 NKRFO15226 690 aaKnown RBP eCLIP16.18■□□□□ 0.18
SREBF1-207ENST00000447641 ST18O60284 1047 aa16.18■□□□□ 0.18
SREBF1-207ENST00000447641 ARIH2O95376 493 aa16.18■□□□□ 0.18
SREBF1-207ENST00000447641 CD2BP2O95400 341 aaKnown RBP16.18■□□□□ 0.18
SREBF1-207ENST00000447641 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-207ENST00000447641 ATN1P54259 1190 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-207ENST00000447641 RTP1P59025 263 aa16.18■□□□□ 0.18
SREBF1-207ENST00000447641 C9orf50Q5SZB4 431 aa16.18■□□□□ 0.18
SREBF1-207ENST00000447641 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-207ENST00000447641 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
SREBF1-207ENST00000447641 CCDC148Q8NFR7 591 aa16.18■□□□□ 0.18
SREBF1-207ENST00000447641 CRYGNQ8WXF5 182 aa16.18■□□□□ 0.18
SREBF1-207ENST00000447641 INPP4AQ96PE3 977 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-207ENST00000447641 LLPHQ9BRT6 129 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms