RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 A0A1W2PQY0 241 aa23.56■■□□□ 1.36
PTX4-203ENST00000447419 RBM47A0AV96 593 aaKnown RBP23.56■■□□□ 1.36
PTX4-203ENST00000447419 PIK3CDO00329 1044 aa23.56■■□□□ 1.36
PTX4-203ENST00000447419 EIF3JO75822 258 aaKnown RBP23.56■■□□□ 1.36
PTX4-203ENST00000447419 ASGR1P07306 291 aa23.56■■□□□ 1.36
PTX4-203ENST00000447419 ACLYP53396 1101 aa23.56■■□□□ 1.36
PTX4-203ENST00000447419 MRPS9P82933 396 aaKnown RBP23.56■■□□□ 1.36
PTX4-203ENST00000447419 SSRP1Q08945 709 aaKnown RBP23.56■■□□□ 1.36
PTX4-203ENST00000447419 ANKRD1Q15327 319 aa23.56■■□□□ 1.36
PTX4-203ENST00000447419 FSCN1Q16658 493 aaKnown RBP23.56■■□□□ 1.36
PTX4-203ENST00000447419 VSIG10LQ86VR7 867 aa23.56■■□□□ 1.36
PTX4-203ENST00000447419 SAMD3Q8N6K7 520 aa23.56■■□□□ 1.36
PTX4-203ENST00000447419 ALDH8A1Q9H2A2 487 aaPredicted RBP23.56■■□□□ 1.36
PTX4-203ENST00000447419 PFKFB2O60825 505 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 TTLL4Q14679 1199 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 CCSAPQ6IQ19 270 aaPredicted RBP23.55■■□□□ 1.36
PTX4-203ENST00000447419 VTI1AQ96AJ9 217 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 RNF26Q9BY78 433 aaPredicted RBP23.55■■□□□ 1.36
PTX4-203ENST00000447419 RIC8AQ9NPQ8 531 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 PCDHA6Q9UN73 950 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 PHF24Q9UPV7 400 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 PCDHA8Q9Y5H6 950 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 MRVI1Q9Y6F6 885 aa23.55■■□□□ 1.36
PTX4-203ENST00000447419 SPDYE3A6NKU9 549 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 H0YGN5 161 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 JAKMIP3Q5VZ66 844 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 CCDC62Q6P9F0 684 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 CXCL17Q6UXB2 119 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 PPP1R13LQ8WUF5 828 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 ZMYND8Q9ULU4 1186 aaPredicted RBP23.54■■□□□ 1.36
PTX4-203ENST00000447419 ATP11BQ9Y2G3 1177 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 SYN1P17600 705 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 PPP1R18Q6NYC8 613 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 SLC39A5Q6ZMH5 540 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 TRIM22Q8IYM9 498 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 RASGRP4Q8TDF6 673 aa23.54■■□□□ 1.36
PTX4-203ENST00000447419 UPF2Q9HAU5 1272 aaKnown RBP23.54■■□□□ 1.36
PTX4-203ENST00000447419 CTDNEP1O95476 244 aa23.53■■□□□ 1.36
PTX4-203ENST00000447419 RBM25P49756 843 aaKnown RBP23.53■■□□□ 1.36
PTX4-203ENST00000447419 RTP1P59025 263 aa23.53■■□□□ 1.36
PTX4-203ENST00000447419 TRIM60Q495X7 471 aa23.53■■□□□ 1.36
PTX4-203ENST00000447419 BCAS3Q9H6U6 928 aa23.53■■□□□ 1.36
PTX4-203ENST00000447419 FRMPD4Q14CM0 1322 aa23.52■■□□□ 1.36
PTX4-203ENST00000447419 hCG_1984214I3L0E3 225 aa23.52■■□□□ 1.36
PTX4-203ENST00000447419 MYL3P08590 195 aa23.52■■□□□ 1.36
PTX4-203ENST00000447419 CST5P28325 142 aaPredicted RBP23.52■■□□□ 1.36
PTX4-203ENST00000447419 SP2Q02086 613 aa23.52■■□□□ 1.36
PTX4-203ENST00000447419 CPLX2Q6PUV4 134 aaKnown RBP23.52■■□□□ 1.36
PTX4-203ENST00000447419 ZNF713Q8N859 430 aaPredicted RBP23.52■■□□□ 1.36
PTX4-203ENST00000447419 STARD7Q9NQZ5 370 aa23.52■■□□□ 1.36
PTX4-203ENST00000447419 GJB4Q9NTQ9 266 aa23.52■■□□□ 1.36
PTX4-203ENST00000447419 DDX41Q9UJV9 622 aaKnown RBP23.52■■□□□ 1.36
PTX4-203ENST00000447419 CHMP4BP1P59074 171 aa23.51■■□□□ 1.35
PTX4-203ENST00000447419 PSMC6P62333 389 aa23.51■■□□□ 1.35
PTX4-203ENST00000447419 PCSK9Q8NBP7 692 aaKnown RBP23.51■■□□□ 1.35
PTX4-203ENST00000447419 AFG1LQ8WV93 481 aa23.51■■□□□ 1.35
PTX4-203ENST00000447419 TSEN34Q9BSV6 310 aaKnown RBP23.51■■□□□ 1.35
PTX4-203ENST00000447419 ANO3Q9BYT9 981 aa23.51■■□□□ 1.35
PTX4-203ENST00000447419 PKD2L1Q9P0L9 805 aa23.51■■□□□ 1.35
PTX4-203ENST00000447419 RBM27Q9P2N5 1060 aaKnown RBP23.51■■□□□ 1.35
PTX4-203ENST00000447419 FOSBP53539 338 aa23.5■■□□□ 1.35
PTX4-203ENST00000447419 ARHGAP1Q07960 439 aa23.5■■□□□ 1.35
PTX4-203ENST00000447419 ST3GAL1Q11201 340 aa23.5■■□□□ 1.35
PTX4-203ENST00000447419 PCNX4Q63HM2 1172 aa23.5■■□□□ 1.35
PTX4-203ENST00000447419 Q9Y3F1 56 aa23.5■■□□□ 1.35
PTX4-203ENST00000447419 MOXD2PA6NHM9 499 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 PQBP1O60828 265 aaKnown RBP23.49■■□□□ 1.35
PTX4-203ENST00000447419 DEXIO95424 95 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 NLRP5P59047 1200 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 GTF3C6Q969F1 213 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 GLT1D1Q96MS3 346 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 ZMYND12Q9H0C1 365 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 C6orf50Q9HD87 102 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 JAK2O60674 1132 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 GH1P01241 217 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 UBA1P22314 1058 aaKnown RBP23.49■■□□□ 1.35
PTX4-203ENST00000447419 SEMA3FQ13275 785 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 UIMC1Q96RL1 719 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 KCNJ14Q9UNX9 436 aa23.49■■□□□ 1.35
PTX4-203ENST00000447419 NKRFO15226 690 aaKnown RBP eCLIP23.48■■□□□ 1.35
PTX4-203ENST00000447419 CDKL5O76039 1030 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 GGPS1O95749 300 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 ITGB5P18084 799 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 CLK2P49760 499 aaKnown RBP23.48■■□□□ 1.35
PTX4-203ENST00000447419 CPT1AP50416 773 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 SP4Q02446 784 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 CCDC83Q8IWF9 413 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 DHX37Q8IY37 1157 aaKnown RBP23.48■■□□□ 1.35
PTX4-203ENST00000447419 CYP2W1Q8TAV3 490 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 CCDC12Q8WUD4 166 aaPredicted RBP23.48■■□□□ 1.35
PTX4-203ENST00000447419 INPP4AQ96PE3 977 aaPredicted RBP23.48■■□□□ 1.35
PTX4-203ENST00000447419 PRDM5Q9NQX1 630 aaPredicted RBP23.48■■□□□ 1.35
PTX4-203ENST00000447419 TELO2Q9Y4R8 837 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 NR2E3Q9Y5X4 410 aa23.48■■□□□ 1.35
PTX4-203ENST00000447419 PDE4DIPQ5VU43 2346 aa23.47■■□□□ 1.35
PTX4-203ENST00000447419 NKX3-2P78367 333 aa23.47■■□□□ 1.35
PTX4-203ENST00000447419 TLE2Q04725 743 aa23.47■■□□□ 1.35
PTX4-203ENST00000447419 REXO1Q8N1G1 1221 aaKnown RBP23.47■■□□□ 1.35
PTX4-203ENST00000447419 TBC1D32Q96NH3 1257 aa23.47■■□□□ 1.35
PTX4-203ENST00000447419 BACH2Q9BYV9 841 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms