RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 DEFB118Q96PH6 123 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 UIMC1Q96RL1 719 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 HMX1Q9NP08 348 aaPredicted RBP15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 POTEFA5A3E0 1075 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 BTBD18B2RXH4 712 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 EDIL3O43854 480 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 SORBS3O60504 671 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 KRT2P35908 639 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 SREBF1P36956 1147 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 ARHGAP4P98171 946 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 STXBP2Q15833 593 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 PCNX4Q63HM2 1172 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 VSIG10LQ86VR7 867 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 COPS5Q92905 334 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 GLT8D2Q9H1C3 349 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 ABHD16BQ9H3Z7 469 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 VTA1Q9NP79 307 aa15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
HLA-DOB-207ENST00000447394 SEPT4O43236 478 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 FOSP01100 380 aaPredicted RBP15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 SMPD1P17405 629 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 SOX10P56693 466 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 SEMA3FQ13275 785 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 INF2Q27J81 1249 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 PIK3AP1Q6ZUJ8 805 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 FBXO18Q8NFZ0 1043 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 TBCKQ8TEA7 893 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 CRYGNQ8WXF5 182 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 MPHOSPH6Q99547 160 aaKnown RBP15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 PKD2L1Q9P0L9 805 aa15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
HLA-DOB-207ENST00000447394 LOC102724159A0A0B4J2E5 919 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 MYADML2A6NDP7 307 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 CCDC85CA6NKD9 419 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 WNT7AO00755 349 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 ITGB5P18084 799 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 PWP2Q15269 919 aaKnown RBP15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 LHX8Q68G74 356 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 GALNT17Q6IS24 598 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 INTS4Q96HW7 963 aaKnown RBP15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 BCAS3Q9H6U6 928 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 NRBP1Q9UHY1 535 aa15.14■□□□□ 0.01
HLA-DOB-207ENST00000447394 RBM47A0AV96 593 aaKnown RBP15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 B4DLN1 442 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 FAM86B1E9PN63 330 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 EIF3JO75822 258 aaKnown RBP15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 TDP2O95551 362 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 FAM86B2P0C5J1 330 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 AKR1A1P14550 325 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 TNFAIP2Q03169 654 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 NONOQ15233 471 aaKnown RBP eCLIP15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 KRT25Q7Z3Z0 450 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 FAM177A1Q8N128 213 aaPredicted RBP15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 U2AF1L4Q8WU68 220 aaKnown RBP15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 BRMS1Q9HCU9 246 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 FAM184BQ9ULE4 1060 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 TELO2Q9Y4R8 837 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 UBIAD1Q9Y5Z9 338 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 WDR81Q562E7 1941 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 SYNRGQ9UMZ2 1314 aa15.13■□□□□ 0.01
HLA-DOB-207ENST00000447394 CCDC194A0A1B0GVG4 234 aa15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 VPS37CA5D8V6 355 aaPredicted RBP15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 PGK1P00558 417 aa15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 HSP90AA1P07900 732 aaKnown RBP15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 ARP10275 920 aa15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 TXNP10599 105 aaKnown RBP15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 SP2Q02086 613 aa15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 CCDC62Q6P9F0 684 aa15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 KIF3AQ9Y496 699 aa15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 MRVI1Q9Y6F6 885 aa15.12■□□□□ 0.01
HLA-DOB-207ENST00000447394 ALPK3Q96L96 1907 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 IGLV3-22A0A075B6J6 115 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 H3BQV1 296 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 GJB1P08034 283 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 RARBP10826 455 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 EN2P19622 333 aaPredicted RBP15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 SYT1P21579 422 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 UBA1P22314 1058 aaKnown RBP15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 ZNF76P36508 570 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 BEX3Q00994 111 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 MCTP1Q6DN14 999 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 TLK2Q86UE8 772 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 TEX2Q8IWB9 1127 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 SCFD2Q8WU76 684 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 GJA10Q969M2 543 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 MXRA8Q9BRK3 442 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 XPNPEP3Q9NQH7 507 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms