RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ARMCX2Q7L311 632 aa20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 VSIG10LQ86VR7 867 aa20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 CHAMP1Q96JM3 812 aa20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 NOL7Q9UMY1 257 aaKnown RBP20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 CYP3A4P08684 503 aa20.47■□□□□ 0.87
TRAPPC4-203ENST00000447216 ZNF76P36508 570 aa20.47■□□□□ 0.87
TRAPPC4-203ENST00000447216 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
TRAPPC4-203ENST00000447216 EEPD1Q7L9B9 569 aa20.47■□□□□ 0.87
TRAPPC4-203ENST00000447216 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
TRAPPC4-203ENST00000447216 RAET1EQ8TD07 263 aa20.47■□□□□ 0.87
TRAPPC4-203ENST00000447216 TINF2Q9BSI4 451 aa20.47■□□□□ 0.87
TRAPPC4-203ENST00000447216 CCNT1O60563 726 aaKnown RBP20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 SNAI1O95863 264 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 XRCC5P13010 732 aaKnown RBP20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 ELNP15502 786 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 CYP2C19P33261 490 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 USP11P51784 963 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 ZNF174Q15697 407 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 STXBP2Q15833 593 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 MAMDC4Q6UXC1 1216 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 FBXO16Q8IX29 292 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 MORC4Q8TE76 937 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 TRIB2Q92519 343 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 UIMC1Q96RL1 719 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 MPHOSPH6Q99547 160 aaKnown RBP20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 FTOQ9C0B1 505 aaKnown RBP eCLIP20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 PCDHB6Q9Y5E3 794 aa20.46■□□□□ 0.87
TRAPPC4-203ENST00000447216 LOC102724159A0A0B4J2E5 919 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 B4DLN1 442 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 FAM86B1E9PN63 330 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 ADCY3O60266 1144 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 FAM86B2P0C5J1 330 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 IRF5Q13568 498 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 PWP2Q15269 919 aaKnown RBP20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 OLFML2BQ68BL8 750 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 XRRA1Q6P2D8 792 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 MXRA8Q9BRK3 442 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 UBIAD1Q9Y5Z9 338 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 PTCH2Q9Y6C5 1203 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 SYNGAP1Q96PV0 1343 aa20.45■□□□□ 0.86
TRAPPC4-203ENST00000447216 SLC37A4O43826 429 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 EIF3JO75822 258 aaKnown RBP20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 RGS20O76081 388 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 IGHA2P01877 340 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 ITGB5P18084 799 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 CIITAP33076 1130 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 MCM7P33993 719 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 TRAPPC10P48553 1259 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 PRMT2P55345 433 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 TRIM32Q13049 653 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 PRR16Q569H4 304 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 RILPL1Q5EBL4 403 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 PRAMEF19Q5SWL8 479 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 SEPT14Q6ZU15 432 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 WDR11Q9BZH6 1224 aa20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 TFIP11Q9UBB9 837 aaKnown RBP20.44■□□□□ 0.86
TRAPPC4-203ENST00000447216 CYP3A7-CYP3A51PA0A087WV96 503 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 CYP3A7P24462 503 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 CEBPZQ03701 1054 aaKnown RBP20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 DNM1Q05193 864 aaKnown RBP20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 CEP55Q53EZ4 464 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 PLA2G4DQ86XP0 818 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 MSL3Q8N5Y2 521 aaKnown RBP20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 MBOAT7Q96N66 472 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 USP28Q96RU2 1077 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 KATNBL1Q9H079 304 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 JADE2Q9NQC1 790 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 DDX25Q9UHL0 483 aaKnown RBP20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 CLIC4Q9Y696 253 aa20.43■□□□□ 0.86
TRAPPC4-203ENST00000447216 IGLV3-22A0A075B6J6 115 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 MEIS1O00470 390 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 ARP10275 920 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 GCFC2P16383 781 aaKnown RBP20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 SEMA3FQ13275 785 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 MFSD14CQ5VZR4 134 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 PPP4R3AQ6IN85 833 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 MOXD1Q6UVY6 613 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 LENG9Q96B70 501 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 INPP4AQ96PE3 977 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 PDGFCQ9NRA1 345 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 ZHX1Q9UKY1 873 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 PTPN22Q9Y2R2 807 aa20.42■□□□□ 0.86
TRAPPC4-203ENST00000447216 STAM2O75886 525 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 ACVR2BQ13705 512 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 CTU1Q7Z7A3 348 aaKnown RBP20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 NLRX1Q86UT6 975 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 TRMT44Q8IYL2 757 aaKnown RBP20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 TNPO1Q92973 898 aaKnown RBP20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 GJA10Q969M2 543 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 ZNF396Q96N95 335 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 NAP1L4Q99733 375 aaKnown RBP20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 TMEM60Q9H2L4 133 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 VTA1Q9NP79 307 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 PKD2L1Q9P0L9 805 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 MRVI1Q9Y6F6 885 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 WDR81Q562E7 1941 aa20.41■□□□□ 0.86
TRAPPC4-203ENST00000447216 NEMFO60524 1076 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms