RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 ZNF227Q86WZ6 799 aa6.54□□□□□ -1.36
RAB5A-205ENST00000446547 C7orf61Q8IZ16 206 aa6.54□□□□□ -1.36
RAB5A-205ENST00000446547 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.54□□□□□ -1.36
RAB5A-205ENST00000446547 KISS1RQ969F8 398 aaPredicted RBP6.54□□□□□ -1.36
RAB5A-205ENST00000446547 VWCEQ96DN2 955 aa6.54□□□□□ -1.36
RAB5A-205ENST00000446547 IPO9Q96P70 1041 aaKnown RBP6.54□□□□□ -1.36
RAB5A-205ENST00000446547 FAM83CQ9BQN1 747 aa6.54□□□□□ -1.36
RAB5A-205ENST00000446547 AARSD1Q9BTE6 412 aaKnown RBP6.54□□□□□ -1.36
RAB5A-205ENST00000446547 GBP3Q9H0R5 595 aa6.54□□□□□ -1.36
RAB5A-205ENST00000446547 FBXL21Q9UKT6 434 aa6.54□□□□□ -1.36
RAB5A-205ENST00000446547 TOPAZ1Q8N9V7 1692 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 SHOXO15266 292 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 PRODHO43272 600 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 LRRN2O75325 713 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 PPM1BO75688 479 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 PABPC4Q13310 644 aaKnown RBP eCLIP6.53□□□□□ -1.36
RAB5A-205ENST00000446547 ANKRD39Q53RE8 183 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 ZC3H12BQ5HYM0 836 aaKnown RBP6.53□□□□□ -1.36
RAB5A-205ENST00000446547 KRT28Q7Z3Y7 464 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 FAM20CQ8IXL6 584 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 NIM1KQ8IY84 436 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 BVESQ8NE79 360 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 BRF1Q92994 677 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 GP6Q9HCN6 339 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 AKT3Q9Y243 479 aa6.53□□□□□ -1.36
RAB5A-205ENST00000446547 MRPS23Q9Y3D9 190 aaKnown RBP6.53□□□□□ -1.36
RAB5A-205ENST00000446547 CDC42BPGQ6DT37 1551 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 CCDC163A0A0D9SF12 145 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 NOP56O00567 594 aaKnown RBP6.52□□□□□ -1.37
RAB5A-205ENST00000446547 LBX1P52954 281 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 RNF4P78317 190 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 CDK5R2Q13319 367 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 SHKBP1Q8TBC3 707 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 NINJ1Q92982 152 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 NCOA5Q9HCD5 579 aaKnown RBP6.52□□□□□ -1.37
RAB5A-205ENST00000446547 WHRNQ9P202 907 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 PLAAQ9Y263 795 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 CUL9Q8IWT3 2517 aa6.52□□□□□ -1.37
RAB5A-205ENST00000446547 CNTNAP4Q9C0A0 1308 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 CCDC144AA2RUR9 1427 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 TSPY4P0CV99 314 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 TSPY10P0CW01 314 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 PABPC1P11940 636 aaKnown RBP6.51□□□□□ -1.37
RAB5A-205ENST00000446547 MYCLP1P12525 358 aaPredicted RBP6.51□□□□□ -1.37
RAB5A-205ENST00000446547 BMP3P12645 472 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 ITGA4P13612 1032 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 ZNF445P59923 1031 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 FSTL1Q12841 308 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 SNW1Q13573 536 aaKnown RBP6.51□□□□□ -1.37
RAB5A-205ENST00000446547 PPP2R5DQ14738 602 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 TM4SF20Q53R12 229 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 NOL9Q5SY16 702 aaKnown RBP6.51□□□□□ -1.37
RAB5A-205ENST00000446547 NSMFQ6X4W1 530 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.51□□□□□ -1.37
RAB5A-205ENST00000446547 SCUBE1Q8IWY4 988 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 RPUSD2Q8IZ73 545 aaKnown RBP6.51□□□□□ -1.37
RAB5A-205ENST00000446547 TOP6BLQ8N6T0 577 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 BTN2A2Q8WVV5 523 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 MFSD3Q96ES6 412 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 YIPF2Q9BWQ6 316 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 COL6A3P12111 3177 aa6.51□□□□□ -1.37
RAB5A-205ENST00000446547 PLD2O14939 933 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 KCNH1O95259 989 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 MAP4P27816 1152 aaKnown RBP6.5□□□□□ -1.37
RAB5A-205ENST00000446547 CNGA1P29973 690 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 ETV3P41162 512 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 MAP7Q14244 749 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 NFKBIBQ15653 356 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 NBPF9Q3BBW0 867 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 OGFOD2Q6N063 350 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 ABI1Q8IZP0 508 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 RNF141Q8WVD5 230 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
RAB5A-205ENST00000446547 OSBP2Q969R2 916 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 MRGPRX3Q96LB0 322 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 IER2Q9BTL4 223 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 FAM126AQ9BYI3 521 aaPredicted RBP6.5□□□□□ -1.37
RAB5A-205ENST00000446547 PRDM14Q9GZV8 571 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 NOL6Q9H6R4 1146 aaKnown RBP6.5□□□□□ -1.37
RAB5A-205ENST00000446547 TPX2Q9ULW0 747 aaKnown RBP6.5□□□□□ -1.37
RAB5A-205ENST00000446547 PCDHB12Q9Y5F1 795 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 CRYBG1Q9Y4K1 1723 aa6.5□□□□□ -1.37
RAB5A-205ENST00000446547 LRPPRCP42704 1394 aaKnown RBP6.49□□□□□ -1.37
RAB5A-205ENST00000446547 LEFTY1O75610 366 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 EOMESO95936 686 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 CAPNS1P04632 268 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 VIL1P09327 827 aaKnown RBP6.49□□□□□ -1.37
RAB5A-205ENST00000446547 FGFR1P11362 822 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 SF1Q15637 639 aaKnown RBP6.49□□□□□ -1.37
RAB5A-205ENST00000446547 SEZ6L2Q6UXD5 910 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 BEND4Q6ZU67 534 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 CBLL1Q75N03 491 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 TRIM59Q8IWR1 403 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 UBR7Q8N806 425 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 FBXL18Q96ME1 805 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 KCNF1Q9H3M0 494 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 GFOD1Q9NXC2 390 aa6.49□□□□□ -1.37
RAB5A-205ENST00000446547 CGGBP1Q9UFW8 167 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms