RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ACADSP16219 412 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ELOA2Q8IYF1 753 aaPredicted RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 MAGEC3Q8TD91 643 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ARMT1Q9H993 441 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 RBM12Q9NTZ6 932 aaKnown RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 PLB1Q6P1J6 1458 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 EIF4A1P60842 406 aaKnown RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 ZSCAN10Q96SZ4 725 aaPredicted RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 SNX1Q13596 522 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 WDR91A4D1P6 747 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 CNGA1P29973 690 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 WDR44Q5JSH3 913 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 WDR78Q5VTH9 848 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 EPM2AIP1Q7L775 607 aaPredicted RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 PRDM1O75626 825 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 IFNB1P01574 187 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 MDM1Q8TC05 714 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 MAIP1Q8WWC4 291 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 CAVIN3Q969G5 261 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ADGRL1O94910 1474 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ZWINTO95229 277 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 FAM200BP0CF97 657 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 INF2Q27J81 1249 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 CABP7Q86V35 215 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 TCHHQ07283 1943 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 A0A0G2JND7 137 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 MKRN3Q13064 507 aaKnown RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 HAUS8Q9BT25 410 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 SLITRK6Q9H5Y7 841 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 C15orf41Q9Y2V0 281 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 MRPS35P82673 323 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 ADAM9Q13443 819 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 MARK3P27448 753 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 PUM3Q15397 648 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 CNOT6LQ96LI5 555 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 SH3TC1Q8TE82 1336 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 HSD17B3P37058 310 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 PCYT1AP49585 367 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 CYLC2Q14093 348 aaPredicted RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 GALNT17Q6IS24 598 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 YTHDF3Q7Z739 585 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 USP37Q86T82 979 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 SMARCAL1Q9NZC9 954 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 GSTA1P08263 222 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 EXOSC10Q01780 885 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 OGFOD1Q8N543 542 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 SPECC1L-ADORA2AF8WAN1 911 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 KRT5P13647 590 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 GSCP56915 257 aaPredicted RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 MAN2A1Q16706 1144 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 ARMCX3Q9UH62 379 aaPredicted RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 SHANK2Q9UPX8 1470 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 PDE6AP16499 860 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 PAPOLAP51003 745 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 MCM9Q9NXL9 1143 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 ADGRL2O95490 1459 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 OR52Z1P0C646 297 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 ZNF654Q8IZM8 581 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 USP40Q9NVE5 1235 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 EHMT1Q9H9B1 1298 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
SMG1-202ENST00000446231 SMYD3Q9H7B4 428 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 GJB4Q9NTQ9 266 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 KIF14Q15058 1648 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 PHBP35232 272 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 PLS1Q14651 629 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 GRAMD1BQ3KR37 738 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 TXKP42681 527 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 NONOQ15233 471 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMG1-202ENST00000446231 MAML1Q92585 1016 aa8.54□□□□□ -1.04
SMG1-202ENST00000446231 RNMTO43148 476 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 GSTO1P78417 241 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 BYSLQ13895 437 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 SPATA21Q7Z572 469 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 PALM2Q8IXS6 379 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 PTPN22Q9Y2R2 807 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 ABCB4P21439 1286 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 NLRP7Q8WX94 980 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 KCNA3P22001 575 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 GDAQ9Y2T3 454 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 CDR2Q01850 454 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 TMED2Q15363 201 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 MFN1Q8IWA4 741 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 RNF217Q8TC41 542 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 MRPL12P52815 198 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 TPD52P55327 224 aaPredicted RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 TRIM10Q9UDY6 481 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 ADD3Q9UEY8 706 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 GSTA2P09210 222 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 PMS2P54278 862 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 REXO1Q8N1G1 1221 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 MSL3Q8N5Y2 521 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms