RNA–Protein interactions for RNA: ENST00000446054.1

HMGN2P11-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 11, humanhuman

BASIC

Gene HMGN2P11, Length 403 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P11-201ENST00000446054 ZNF365Q70YC5 407 aa12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 CMTR1Q8N1G2 835 aaKnown RBP12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 TMEM87BQ96K49 555 aa12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 GUCD1Q96NT3 240 aa12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 MAP3K14Q99558 947 aa12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 MTA3Q9BTC8 594 aa12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 WNT8AQ9H1J5 351 aa12.71□□□□□ -0.37
HMGN2P11-201ENST00000446054 KPNA6O60684 536 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 DDAH1O94760 285 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 MMP3P08254 477 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 KIF5BP33176 963 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 TRAF1Q13077 416 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 VSIG10LQ86VR7 867 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 TMTC2Q8N394 836 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 SRBD1Q8N5C6 995 aaKnown RBP12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 SAMD3Q8N6K7 520 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 SCLYQ96I15 445 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 SPZ1Q9BXG8 430 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 TTYH1Q9H313 450 aaPredicted RBP12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 IL23AQ9NPF7 189 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 STXBP5LQ9Y2K9 1186 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 MRVI1Q9Y6F6 885 aa12.7□□□□□ -0.38
HMGN2P11-201ENST00000446054 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 GRXCR1A8MXD5 290 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 LIFRP42702 1097 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 SP2Q02086 613 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 KAT2BQ92831 832 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 VWCEQ96DN2 955 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 RRP36Q96EU6 259 aaKnown RBP12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
HMGN2P11-201ENST00000446054 SCN5AQ14524 2016 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 hCG_1642624A0A1W2PR95 340 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 CDC45O75419 566 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 FGBP02675 491 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 PSRC1Q6PGN9 363 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 USP17L6PQ6QN14 398 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 OTOP2Q7RTS6 562 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 TCEANC2Q96MN5 208 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 NEK1Q96PY6 1258 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 CDX2Q99626 313 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 CXXC1Q9P0U4 656 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
HMGN2P11-201ENST00000446054 MEIS2O14770 477 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 GGPS1O95749 300 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 CALM1P0DP23 149 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 CALM2P0DP24 149 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 CALM3P0DP25 149 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 DNAJB2P25686 324 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 CCND2P30279 289 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 PBX2P40425 430 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 GNAQP50148 359 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 MRPS9P82933 396 aaKnown RBP12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 EXOSC10Q01780 885 aaKnown RBP12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 PTPN11Q06124 597 aaPredicted RBP12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 LAMC2Q13753 1193 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 DGKDQ16760 1214 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 HSDL1Q3SXM5 330 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 FANCBQ8NB91 859 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 EMID1Q96A84 441 aaPredicted RBP12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 SEC63Q9UGP8 760 aaKnown RBP12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
HMGN2P11-201ENST00000446054 DOCK5Q9H7D0 1870 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 ZNF286BP0CG31 522 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 UBA1P22314 1058 aaKnown RBP12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 PTGISQ16647 500 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 CELF3Q5SZQ8 465 aaKnown RBP12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 GDF6Q6KF10 455 aaPredicted RBP12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 KCNV1Q6PIU1 500 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 DHX32Q7L7V1 743 aaKnown RBP12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 DEFB128Q7Z7B8 93 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 SGMS1Q86VZ5 419 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 MICU3Q86XE3 530 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 PPTC7Q8NI37 304 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 SPATA33Q96N06 139 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
HMGN2P11-201ENST00000446054 ALG1Q9BT22 464 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms