RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 TOP1P11387 765 aaKnown RBP17.4■□□□□ 0.38
UBE2F-216ENST00000445676 SSTR3P32745 418 aaPredicted RBP17.4■□□□□ 0.38
UBE2F-216ENST00000445676 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
UBE2F-216ENST00000445676 PTCRAQ6ISU1 281 aaPredicted RBP17.4■□□□□ 0.38
UBE2F-216ENST00000445676 FAM117BQ6P1L5 589 aa17.4■□□□□ 0.38
UBE2F-216ENST00000445676 TRAF7Q6Q0C0 670 aa17.4■□□□□ 0.38
UBE2F-216ENST00000445676 C17orf80Q9BSJ5 609 aa17.4■□□□□ 0.38
UBE2F-216ENST00000445676 GTF2IRD1Q9UHL9 959 aa17.4■□□□□ 0.38
UBE2F-216ENST00000445676 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
UBE2F-216ENST00000445676 FGRP09769 529 aa17.39■□□□□ 0.37
UBE2F-216ENST00000445676 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
UBE2F-216ENST00000445676 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
UBE2F-216ENST00000445676 TRIM71Q2Q1W2 868 aaKnown RBP17.39■□□□□ 0.37
UBE2F-216ENST00000445676 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
UBE2F-216ENST00000445676 WNT8BQ93098 351 aa17.39■□□□□ 0.37
UBE2F-216ENST00000445676 HDAC6Q9UBN7 1215 aa17.39■□□□□ 0.37
UBE2F-216ENST00000445676 PNMA2Q9UL42 364 aa17.39■□□□□ 0.37
UBE2F-216ENST00000445676 GRXCR2A6NFK2 248 aa17.38■□□□□ 0.37
UBE2F-216ENST00000445676 GH1P01241 217 aa17.38■□□□□ 0.37
UBE2F-216ENST00000445676 MRE11P49959 708 aa17.38■□□□□ 0.37
UBE2F-216ENST00000445676 ZNF543Q08ER8 600 aa17.38■□□□□ 0.37
UBE2F-216ENST00000445676 FBXO22Q8NEZ5 403 aa17.38■□□□□ 0.37
UBE2F-216ENST00000445676 UIMC1Q96RL1 719 aa17.38■□□□□ 0.37
UBE2F-216ENST00000445676 TECTAO75443 2155 aa17.38■□□□□ 0.37
UBE2F-216ENST00000445676 B4DLN1 442 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 EFCAB14O75071 495 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 ALADP13716 330 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 MRPL12P52815 198 aaKnown RBP17.37■□□□□ 0.37
UBE2F-216ENST00000445676 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
UBE2F-216ENST00000445676 IKBKEQ14164 716 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 USH1GQ495M9 461 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 RRP12Q5JTH9 1297 aaKnown RBP17.37■□□□□ 0.37
UBE2F-216ENST00000445676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.37■□□□□ 0.37
UBE2F-216ENST00000445676 SEPT14Q6ZU15 432 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 CHST3Q7LGC8 479 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 NEK9Q8TD19 979 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 TCP11L1Q9NUJ3 509 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 COL20A1Q9P218 1284 aa17.37■□□□□ 0.37
UBE2F-216ENST00000445676 H3BQ06 376 aaPredicted RBP17.36■□□□□ 0.37
UBE2F-216ENST00000445676 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
UBE2F-216ENST00000445676 PSEN2P49810 448 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 NHLH1Q02575 133 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 PTK7Q13308 1070 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 ZNF618Q5T7W0 954 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 RGS22Q8NE09 1264 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 TBC1D5Q92609 795 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 MRPL38Q96DV4 380 aaKnown RBP17.36■□□□□ 0.37
UBE2F-216ENST00000445676 ALG1Q9BT22 464 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 COL4A6Q14031 1691 aa17.36■□□□□ 0.37
UBE2F-216ENST00000445676 HAS3O00219 553 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 DCXO43602 365 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 F2P00734 622 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 ZNF286BP0CG31 522 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 HTRA4P83105 476 aaPredicted RBP17.35■□□□□ 0.37
UBE2F-216ENST00000445676 ZNF200P98182 395 aaPredicted RBP17.35■□□□□ 0.37
UBE2F-216ENST00000445676 MFSD10Q14728 455 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 ALX1Q15699 326 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 DGKDQ16760 1214 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 SP7Q8TDD2 431 aaPredicted RBP17.35■□□□□ 0.37
UBE2F-216ENST00000445676 SYTL5Q8TDW5 730 aaPredicted RBP17.35■□□□□ 0.37
UBE2F-216ENST00000445676 TAAR1Q96RJ0 339 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 INSL6Q9Y581 213 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 LAMA4Q16363 1823 aa17.35■□□□□ 0.37
UBE2F-216ENST00000445676 POTEB3A0JP26 581 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 LGR5O75473 907 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 HIC1Q14526 733 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 CSPP1Q1MSJ5 1256 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 KIAA0753Q2KHM9 967 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 PUS10Q3MIT2 529 aaKnown RBP17.34■□□□□ 0.37
UBE2F-216ENST00000445676 POTEBQ6S5H4 581 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 MYOCDQ8IZQ8 938 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
UBE2F-216ENST00000445676 FBXL18Q96ME1 805 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 KATNAL1Q9BW62 490 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 DOCK5Q9H7D0 1870 aa17.34■□□□□ 0.37
UBE2F-216ENST00000445676 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
UBE2F-216ENST00000445676 KAT6AQ92794 2004 aa17.33■□□□□ 0.37
UBE2F-216ENST00000445676 GOLGA8HP0CJ92 632 aa17.33■□□□□ 0.36
UBE2F-216ENST00000445676 ZP2Q05996 745 aa17.33■□□□□ 0.36
UBE2F-216ENST00000445676 EPC2Q52LR7 807 aa17.33■□□□□ 0.36
UBE2F-216ENST00000445676 TIGD5Q53EQ6 642 aa17.33■□□□□ 0.36
UBE2F-216ENST00000445676 DBF4BQ8NFT6 615 aa17.33■□□□□ 0.36
UBE2F-216ENST00000445676 NSUN6Q8TEA1 469 aaKnown RBP17.33■□□□□ 0.36
UBE2F-216ENST00000445676 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
UBE2F-216ENST00000445676 ZDBF2Q9HCK1 2354 aa17.33■□□□□ 0.36
UBE2F-216ENST00000445676 FGAP02671 866 aa17.32■□□□□ 0.36
UBE2F-216ENST00000445676 COL19A1Q14993 1142 aa17.32■□□□□ 0.36
UBE2F-216ENST00000445676 STXBP2Q15833 593 aa17.32■□□□□ 0.36
UBE2F-216ENST00000445676 CDC37Q16543 378 aaPredicted RBP17.32■□□□□ 0.36
UBE2F-216ENST00000445676 PTPROQ16827 1216 aa17.32■□□□□ 0.36
UBE2F-216ENST00000445676 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
UBE2F-216ENST00000445676 MIER1Q8N108 512 aa17.32■□□□□ 0.36
UBE2F-216ENST00000445676 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
UBE2F-216ENST00000445676 PABPC5Q96DU9 382 aaKnown RBP17.32■□□□□ 0.36
UBE2F-216ENST00000445676 RMDN3Q96TC7 470 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms