RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 RIPK3Q9Y572 518 aa9.48□□□□□ -0.89
LINC02549-201ENST00000445346 TTC28Q96AY4 2481 aa9.48□□□□□ -0.89
LINC02549-201ENST00000445346 ZNFX1Q9P2E3 1918 aaKnown RBP9.47□□□□□ -0.89
LINC02549-201ENST00000445346 DNAJC25-GNG10A0A024R161 153 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 MINDY4BA8MYZ0 360 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 ESPNB1AK53 854 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 NDUFB10O96000 172 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 FGBP02675 491 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 ATP5JP18859 108 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 CYP2C18P33260 490 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 GJA9P57773 515 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 CBLBQ13191 982 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 NR5A1Q13285 461 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 UBE3CQ15386 1083 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 LCE2CQ5TA81 110 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 C16orf59Q7L2K0 433 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 FAM126BQ8IXS8 530 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
LINC02549-201ENST00000445346 ZNF444Q8N0Y2 327 aaPredicted RBP9.47□□□□□ -0.89
LINC02549-201ENST00000445346 CHST13Q8NET6 341 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 PANK1Q8TE04 598 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 ADAMTS19Q8TE59 1207 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 UHRF1Q96T88 793 aaPredicted RBP9.47□□□□□ -0.89
LINC02549-201ENST00000445346 HAUS7Q99871 368 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 NYAP2Q9P242 653 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 FBXO40Q9UH90 709 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 FEM1BQ9UK73 627 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 PRUNE2Q8WUY3 3088 aa9.47□□□□□ -0.89
LINC02549-201ENST00000445346 ATP2A1O14983 1001 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 ZEB2O60315 1214 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 CHGBP05060 677 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 BEX3Q00994 111 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 TNFAIP2Q03169 654 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 IKQ13123 557 aaPredicted RBP9.46□□□□□ -0.9
LINC02549-201ENST00000445346 PPP1R26Q5T8A7 1209 aaPredicted RBP9.46□□□□□ -0.9
LINC02549-201ENST00000445346 ZNF787Q6DD87 383 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 ARMCX2Q7L311 632 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 OTOP2Q7RTS6 562 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 CCDC144CPQ8IYA2 1237 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 HERVK_113Q902F9 699 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 PUS7LQ9H0K6 701 aaKnown RBP9.46□□□□□ -0.9
LINC02549-201ENST00000445346 AP5M1Q9H0R1 490 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 UPF3AQ9H1J1 476 aaKnown RBP9.46□□□□□ -0.9
LINC02549-201ENST00000445346 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 HIPK3Q9H422 1215 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 ZNF287Q9HBT7 754 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 IL23AQ9NPF7 189 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
LINC02549-201ENST00000445346 SPTBN5Q9NRC6 3674 aaKnown RBP9.45□□□□□ -0.9
LINC02549-201ENST00000445346 ADCY6O43306 1168 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 CABYRO75952 493 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 APPP05067 770 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 RASA1P20936 1047 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 CCL23P55773 120 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 HNRNPUQ00839 825 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC02549-201ENST00000445346 NR1H3Q13133 447 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 SBK1Q52WX2 424 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 RASIP1Q5U651 963 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 CXCL17Q6UXB2 119 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 RPUSD2Q8IZ73 545 aaKnown RBP9.45□□□□□ -0.9
LINC02549-201ENST00000445346 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
LINC02549-201ENST00000445346 SLC38A10Q9HBR0 1119 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 ZBED9Q6R2W3 1325 aa9.45□□□□□ -0.9
LINC02549-201ENST00000445346 COL11A1P12107 1806 aaPredicted RBP9.45□□□□□ -0.9
LINC02549-201ENST00000445346 MYH8P13535 1937 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.44□□□□□ -0.9
LINC02549-201ENST00000445346 ASB14A6NK59 587 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 DYNC1LI2O43237 492 aaPredicted RBP9.44□□□□□ -0.9
LINC02549-201ENST00000445346 TTLL1O95922 423 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 CD4P01730 458 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 TDO2P48775 406 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 OAZ1P54368 228 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 RAB15P59190 212 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 ITGA7Q13683 1181 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 ADGRE1Q14246 886 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 TLK2Q86UE8 772 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 CCDC116Q8IYX3 515 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 STRBPQ96SI9 672 aaKnown RBP9.44□□□□□ -0.9
LINC02549-201ENST00000445346 CHMP4BQ9H444 224 aaKnown RBP9.44□□□□□ -0.9
LINC02549-201ENST00000445346 ACAD9Q9H845 621 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
LINC02549-201ENST00000445346 RAPGEFL1Q9UHV5 662 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 DDX19BQ9UMR2 479 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 SLC4A7Q9Y6M7 1214 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 PLXNA1Q9UIW2 1896 aa9.44□□□□□ -0.9
LINC02549-201ENST00000445346 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
LINC02549-201ENST00000445346 MYO9BQ13459 2157 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 GSG1L2A8MUP6 293 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 ERVH48-1M5A8F1 160 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 LILRA1O75019 489 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 PRDM1O75626 825 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 BMP3P12645 472 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
LINC02549-201ENST00000445346 RABGGTBP53611 331 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 CNTN2Q02246 1040 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 VAC14Q08AM6 782 aa9.43□□□□□ -0.9
LINC02549-201ENST00000445346 FSCN1Q16658 493 aaKnown RBP9.43□□□□□ -0.9
LINC02549-201ENST00000445346 AAK1Q2M2I8 961 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms