RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 B4GALT4O60513 344 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 HMGB1P09429 215 aaKnown RBP21.03■□□□□ 0.96
VCX3B-203ENST00000444481 MYCLP12524 364 aaPredicted RBP21.03■□□□□ 0.96
VCX3B-203ENST00000444481 CCND2P30279 289 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 SMAD3P84022 425 aaKnown RBP21.03■□□□□ 0.96
VCX3B-203ENST00000444481 EXOSC10Q01780 885 aaKnown RBP21.03■□□□□ 0.96
VCX3B-203ENST00000444481 LAMC2Q13753 1193 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 PIBF1Q8WXW3 757 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 RNPC3Q96LT9 517 aaKnown RBP21.03■□□□□ 0.96
VCX3B-203ENST00000444481 LRRC2Q9BYS8 371 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 PPP1R12CQ9BZL4 782 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 TRPV6Q9H1D0 765 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 HIPK3Q9H422 1215 aa21.03■□□□□ 0.96
VCX3B-203ENST00000444481 STAM2O75886 525 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 PLEKHA8P1O95397 391 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 MMP3P08254 477 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 TGFB3P10600 412 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 CASTP20810 708 aaKnown RBP21.02■□□□□ 0.96
VCX3B-203ENST00000444481 NBPF20Q3BBV1 942 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 RASEFQ8IZ41 740 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 AFG1LQ8WV93 481 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 CUL5Q93034 780 aa21.02■□□□□ 0.96
VCX3B-203ENST00000444481 LAMA2P24043 3122 aaKnown RBP21.02■□□□□ 0.95
VCX3B-203ENST00000444481 PIK3CDO00329 1044 aa21.01■□□□□ 0.95
VCX3B-203ENST00000444481 CSF2RAP15509 400 aa21.01■□□□□ 0.95
VCX3B-203ENST00000444481 RXRAP19793 462 aa21.01■□□□□ 0.95
VCX3B-203ENST00000444481 PSRC1Q6PGN9 363 aaPredicted RBP21.01■□□□□ 0.95
VCX3B-203ENST00000444481 DHX37Q8IY37 1157 aaKnown RBP21.01■□□□□ 0.95
VCX3B-203ENST00000444481 NOC4LQ9BVI4 516 aaKnown RBP21.01■□□□□ 0.95
VCX3B-203ENST00000444481 RBM28Q9NW13 759 aaKnown RBP21.01■□□□□ 0.95
VCX3B-203ENST00000444481 FRMPD4Q14CM0 1322 aa21.01■□□□□ 0.95
VCX3B-203ENST00000444481 RGS20O76081 388 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 CYP2C18P33260 490 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 DGKDQ16760 1214 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 GNPTABQ3T906 1256 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 FAM47CQ5HY64 1035 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 APOA5Q6Q788 366 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 TMTC3Q6ZXV5 915 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 MICU3Q86XE3 530 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 SMARCC2Q8TAQ2 1214 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 KCNB2Q92953 911 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 BUD13Q9BRD0 619 aaKnown RBP eCLIP21■□□□□ 0.95
VCX3B-203ENST00000444481 IL23AQ9NPF7 189 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 MTMR10Q9NXD2 777 aa21■□□□□ 0.95
VCX3B-203ENST00000444481 RCAN1P53805 252 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 ADCK5Q3MIX3 580 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 TMEM240Q5SV17 173 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 XRRA1Q6P2D8 792 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 Q7L0L9 218 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 C16orf59Q7L2K0 433 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 CMTR1Q8N1G2 835 aaKnown RBP20.99■□□□□ 0.95
VCX3B-203ENST00000444481 IL31RAQ8NI17 732 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 PPTC7Q8NI37 304 aa20.99■□□□□ 0.95
VCX3B-203ENST00000444481 TRMT13Q9NUP7 481 aaKnown RBP20.99■□□□□ 0.95
VCX3B-203ENST00000444481 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.98■□□□□ 0.95
VCX3B-203ENST00000444481 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.98■□□□□ 0.95
VCX3B-203ENST00000444481 REC8O95072 547 aa20.98■□□□□ 0.95
VCX3B-203ENST00000444481 CELF3Q5SZQ8 465 aaKnown RBP20.98■□□□□ 0.95
VCX3B-203ENST00000444481 ZNF697Q5TEC3 545 aa20.98■□□□□ 0.95
VCX3B-203ENST00000444481 MYSM1Q5VVJ2 828 aa20.98■□□□□ 0.95
VCX3B-203ENST00000444481 SESTD1Q86VW0 696 aa20.98■□□□□ 0.95
VCX3B-203ENST00000444481 RPUSD2Q8IZ73 545 aaKnown RBP20.98■□□□□ 0.95
VCX3B-203ENST00000444481 KATNAL1Q9BW62 490 aa20.98■□□□□ 0.95
VCX3B-203ENST00000444481 MEIS2O14770 477 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 ZBTB43O43298 467 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 EPB41L2O43491 1005 aaKnown RBP20.97■□□□□ 0.95
VCX3B-203ENST00000444481 PPFIA4O75335 1185 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 HOXD8P13378 290 aaPredicted RBP20.97■□□□□ 0.95
VCX3B-203ENST00000444481 ICAM3P32942 547 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 HSPA4P34932 840 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 ERICH6BQ5W0A0 696 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 USP17L6PQ6QN14 398 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 RAB11FIP4Q86YS3 637 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 TEX2Q8IWB9 1127 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 INPP4AQ96PE3 977 aaPredicted RBP20.97■□□□□ 0.95
VCX3B-203ENST00000444481 PSTPIP2Q9H939 334 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 UMODL1Q5DID0 1318 aa20.97■□□□□ 0.95
VCX3B-203ENST00000444481 GGPS1O95749 300 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 CCL23P55773 120 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 MRPS9P82933 396 aaKnown RBP20.96■□□□□ 0.95
VCX3B-203ENST00000444481 RTN1Q16799 776 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 RASIP1Q5U651 963 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 PCNX4Q63HM2 1172 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 ZNF365Q70YC5 407 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 CCDC82Q8N4S0 544 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 KAT2BQ92831 832 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 TCEANC2Q96MN5 208 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 WNT8AQ9H1J5 351 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 MTIF3Q9H2K0 278 aaKnown RBP20.96■□□□□ 0.95
VCX3B-203ENST00000444481 BRPF3Q9ULD4 1205 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 MYH7BA7E2Y1 1941 aa20.96■□□□□ 0.95
VCX3B-203ENST00000444481 TMEM265A0A087WTH1 108 aa20.95■□□□□ 0.94
VCX3B-203ENST00000444481 PITPNM1O00562 1244 aa20.95■□□□□ 0.94
VCX3B-203ENST00000444481 FGBP02675 491 aa20.95■□□□□ 0.94
VCX3B-203ENST00000444481 PFKMP08237 780 aa20.95■□□□□ 0.94
VCX3B-203ENST00000444481 ACRP10323 421 aa20.95■□□□□ 0.94
VCX3B-203ENST00000444481 CYP2C9P11712 490 aa20.95■□□□□ 0.94
VCX3B-203ENST00000444481 UBA1P22314 1058 aaKnown RBP20.95■□□□□ 0.94
VCX3B-203ENST00000444481 FGD1P98174 961 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms