RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NBPF20Q3BBV1 942 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 FCHSD1Q86WN1 690 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 KAT2BQ92831 832 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 MAP3K14Q99558 947 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-203ENST00000444440 BCAS3Q9H6U6 928 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 DDX41Q9UJV9 622 aaKnown RBP12.6□□□□□ -0.39
SF3A1-203ENST00000444440 FRMPD4Q14CM0 1322 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 VCANP13611 3396 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 TLR3O15455 904 aaKnown RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 SORBS3O60504 671 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 CYP2C9P11712 490 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 MYCLP12524 364 aaPredicted RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 CPA1P15085 419 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 LIFRP42702 1097 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 MRPS9P82933 396 aaKnown RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 EXOSC10Q01780 885 aaKnown RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 SP2Q02086 613 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 SGMS1Q86VZ5 419 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 CTCFLQ8NI51 663 aaPredicted RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 FAM161BQ96MY7 647 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 GUCD1Q96NT3 240 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 CTAGE1Q96RT6 745 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 MPHOSPH6Q99547 160 aaKnown RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 MTG1Q9BT17 334 aaPredicted RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
SF3A1-203ENST00000444440 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 BRPF3Q9ULD4 1205 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 TELO2Q9Y4R8 837 aa12.59□□□□□ -0.39
SF3A1-203ENST00000444440 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 GCOM1H8Y6P7 765 aaPredicted RBP12.58□□□□□ -0.4
SF3A1-203ENST00000444440 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
SF3A1-203ENST00000444440 GH1P01241 217 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 POLR2MP0CAP2 368 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 CCL23P55773 120 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 SEMA3FQ13275 785 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 ERICH6BQ5W0A0 696 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 USP17L6PQ6QN14 398 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 VSIG10LQ86VR7 867 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 SCLYQ96I15 445 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
SF3A1-203ENST00000444440 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
SF3A1-203ENST00000444440 HIPK3Q9H422 1215 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 MAP3K20Q9NYL2 800 aaKnown RBP12.58□□□□□ -0.4
SF3A1-203ENST00000444440 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
SF3A1-203ENST00000444440 GRXCR1A8MXD5 290 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 B4DLN1 442 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 MEIS2O14770 477 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 MRPL12P52815 198 aaKnown RBP12.57□□□□□ -0.4
SF3A1-203ENST00000444440 TSGA10IPQ3SY00 556 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 RASIP1Q5U651 963 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 APOA5Q6Q788 366 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 TMTC3Q6ZXV5 915 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 ZNF365Q70YC5 407 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 KCNB2Q92953 911 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 RRP36Q96EU6 259 aaKnown RBP12.57□□□□□ -0.4
SF3A1-203ENST00000444440 CXXC1Q9P0U4 656 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-203ENST00000444440 MRVI1Q9Y6F6 885 aa12.57□□□□□ -0.4
SF3A1-203ENST00000444440 ZNF286BP0CG31 522 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 UBA1P22314 1058 aaKnown RBP12.56□□□□□ -0.4
SF3A1-203ENST00000444440 SMARCA1P28370 1054 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 KIF5BP33176 963 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 SMAD3P84022 425 aaKnown RBP12.56□□□□□ -0.4
SF3A1-203ENST00000444440 FUT2Q10981 343 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 PPIGQ13427 754 aaKnown RBP eCLIP12.56□□□□□ -0.4
SF3A1-203ENST00000444440 HIC1Q14526 733 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 UBE2SQ16763 222 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 HSDL1Q3SXM5 330 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 FAM47CQ5HY64 1035 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
SF3A1-203ENST00000444440 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 TMTC2Q8N394 836 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 TMEM199Q8N511 208 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 SAMD3Q8N6K7 520 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
SF3A1-203ENST00000444440 IL23AQ9NPF7 189 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
SF3A1-203ENST00000444440 SNX14Q9Y5W7 946 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 A0A0C4DFX4 3053 aa12.56□□□□□ -0.4
SF3A1-203ENST00000444440 MYH9P35579 1960 aaKnown RBP12.56□□□□□ -0.4
SF3A1-203ENST00000444440 COL4A4P53420 1690 aaPredicted RBP12.55□□□□□ -0.4
SF3A1-203ENST00000444440 GGPS1O95749 300 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 HOXD8P13378 290 aaPredicted RBP12.55□□□□□ -0.4
SF3A1-203ENST00000444440 CDC27P30260 824 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 CCND2P30279 289 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 PBX2P40425 430 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms