RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 RCCD1A6NED2 376 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 IFNAR2P48551 515 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ZBTB16Q05516 673 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 PDXDC1Q6P996 788 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 TTLL7Q6ZT98 887 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 OR2W6PQ8NHA6 318 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 SPATA20Q8TB22 786 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ESR2Q92731 530 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 CABP4P57796 275 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 PTPN12Q05209 780 aaKnown RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 BLMHQ13867 455 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 VSIG1Q86XK7 387 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 DNAJC9Q8WXX5 260 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 P2RX5Q93086 422 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 COL15A1P39059 1388 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 SLC39A6Q13433 755 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 WDR59Q6PJI9 974 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 LONP2Q86WA8 852 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 RAPGEF4Q8WZA2 1011 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 DAPK3O43293 454 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 SLCO1A2P46721 670 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 COPS2P61201 443 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 SNX1Q13596 522 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ANKRD20A2Q5SQ80 823 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ANKRD20A1Q5TYW2 823 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 RASIP1Q5U651 963 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ANKRD20A3Q5VUR7 823 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 AGAP11Q8TF27 550 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 NAF1Q96HR8 494 aaKnown RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 MED15Q96RN5 788 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ISCUQ9H1K1 167 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 KLHL30Q0D2K2 578 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CYB5R4Q7L1T6 521 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 MAGEB6Q8N7X4 407 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CNKSR1Q969H4 720 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.48□□□□□ -1.532e-8■■■■■ 40.2
HERC1-201ENST00000443617 SERPING1P05155 500 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 MRPS35P82673 323 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 DAAM2Q86T65 1068 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 PUS7LQ9H0K6 701 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 MAGEF1Q9HAY2 307 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 BZW2Q9Y6E2 419 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 ZAP70P43403 619 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 LRRC34Q8IZ02 419 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 EIF1ADQ8N9N8 165 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 EBF2Q9HAK2 575 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 SEPT11Q9NVA2 429 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 CHN1P15882 459 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CDC25CP30307 473 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 AKNAD1Q5T1N1 836 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ZMYND12Q9H0C1 365 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 MINDY4BA8MYZ0 360 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CAND2O75155 1236 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CIB2O75838 187 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ERMARDQ5T6L9 678 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 SOGA3Q5TF21 947 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 NDST4Q9H3R1 872 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 SLC12A4Q9UP95 1085 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 C2CD2Q9Y426 696 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 PLTPP55058 493 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 MIS18BP1Q6P0N0 1132 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 PDXDC2PQ6P474 469 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ATG9AQ7Z3C6 839 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 SPICE1Q8N0Z3 855 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CENPTQ96BT3 561 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 RTL9Q8NET4 1388 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 NVLO15381 856 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 LONP1P36776 959 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 ALDH5A1P51649 535 aaPredicted RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 COL23A1Q86Y22 540 aaPredicted RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 AGGF1Q8N302 714 aaeCLIP5.48□□□□□ -1.535e-7■■■□□ 14.7
HERC1-201ENST00000443617 GORASP1Q9BQQ3 440 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ADAM22Q9P0K1 906 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 MYH10P35580 1976 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CPDO75976 1380 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 A0A1W2PRG0 241 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 MAP3K7O43318 606 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 FESP07332 822 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CLUL1Q15846 466 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 DLGAP2Q9P1A6 1054 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 PNMA2Q9UL42 364 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 LRRC7Q96NW7 1537 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 TRAF5O00463 557 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ZNF131P52739 623 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ARHGAP18Q8N392 663 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 PLBD2Q8NHP8 589 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 L3MBTL3Q96JM7 780 aaPredicted RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 PURBQ96QR8 312 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 LRP2BPQ9P2M1 347 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 GON4LQ3T8J9 2241 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 SMNDC1O75940 238 aaKnown RBP eCLIP5.48□□□□□ -1.533e-6■■□□□ 13.1
HERC1-201ENST00000443617 MYL1P05976 194 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 CCDC25Q86WR0 208 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ANKRD42Q8N9B4 389 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 FAM217BQ9NTX9 383 aaPredicted RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 LMNAP02545 664 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 PPP1R2P41236 205 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 IFIT1BQ5T764 474 aaKnown RBP5.48□□□□□ -1.53
HERC1-201ENST00000443617 VPS52Q8N1B4 723 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms