RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 SMAD3P84022 425 aaKnown RBP18.83■□□□□ 0.6
ATG4C-205ENST00000443289 KCNV1Q6PIU1 500 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 Q7L0L9 218 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 VSIG10LQ86VR7 867 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 FCHSD1Q86WN1 690 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 PIBF1Q8WXW3 757 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 MTMR10Q9NXD2 777 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 SNX14Q9Y5W7 946 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 MRVI1Q9Y6F6 885 aa18.83■□□□□ 0.6
ATG4C-205ENST00000443289 BAZ2BQ9UIF8 2168 aaKnown RBP18.83■□□□□ 0.6
ATG4C-205ENST00000443289 CSF2RAP15509 400 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 CCND2P30279 289 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 CYP2C18P33260 490 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 PTPN11Q06124 597 aaPredicted RBP18.82■□□□□ 0.6
ATG4C-205ENST00000443289 ARHGAP1Q07960 439 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 KRT32Q14532 448 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 PGM5Q15124 567 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 NBPF20Q3BBV1 942 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 NFRKBQ6P4R8 1299 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 SYNE3Q6ZMZ3 975 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 SGMS1Q86VZ5 419 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 SRBD1Q8N5C6 995 aaKnown RBP18.82■□□□□ 0.6
ATG4C-205ENST00000443289 AFG1LQ8WV93 481 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 TCEANC2Q96MN5 208 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
ATG4C-205ENST00000443289 MMP3P08254 477 aa18.81■□□□□ 0.6
ATG4C-205ENST00000443289 CPA1P15085 419 aa18.81■□□□□ 0.6
ATG4C-205ENST00000443289 CASTP20810 708 aaKnown RBP18.81■□□□□ 0.6
ATG4C-205ENST00000443289 LAMC2Q13753 1193 aa18.81■□□□□ 0.6
ATG4C-205ENST00000443289 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
ATG4C-205ENST00000443289 FANCBQ8NB91 859 aa18.81■□□□□ 0.6
ATG4C-205ENST00000443289 EMID1Q96A84 441 aaPredicted RBP18.81■□□□□ 0.6
ATG4C-205ENST00000443289 JAKMIP1Q96N16 626 aaKnown RBP18.81■□□□□ 0.6
ATG4C-205ENST00000443289 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.6
ATG4C-205ENST00000443289 NOC4LQ9BVI4 516 aaKnown RBP18.81■□□□□ 0.6
ATG4C-205ENST00000443289 PLEKHA8P1O95397 391 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 TGFB3P10600 412 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 RXRAP19793 462 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 EXOSC10Q01780 885 aaKnown RBP18.8■□□□□ 0.6
ATG4C-205ENST00000443289 DGKDQ16760 1214 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 FAM47CQ5HY64 1035 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 TMEM240Q5SV17 173 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 PSRC1Q6PGN9 363 aaPredicted RBP18.8■□□□□ 0.6
ATG4C-205ENST00000443289 C16orf59Q7L2K0 433 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 DHX37Q8IY37 1157 aaKnown RBP18.8■□□□□ 0.6
ATG4C-205ENST00000443289 CUL5Q93034 780 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 IL23AQ9NPF7 189 aa18.8■□□□□ 0.6
ATG4C-205ENST00000443289 TRMT13Q9NUP7 481 aaKnown RBP18.8■□□□□ 0.6
ATG4C-205ENST00000443289 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.79■□□□□ 0.6
ATG4C-205ENST00000443289 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.79■□□□□ 0.6
ATG4C-205ENST00000443289 STAM2O75886 525 aa18.79■□□□□ 0.6
ATG4C-205ENST00000443289 RGS20O76081 388 aa18.79■□□□□ 0.6
ATG4C-205ENST00000443289 HMGB1P09429 215 aaKnown RBP18.79■□□□□ 0.6
ATG4C-205ENST00000443289 ZNF697Q5TEC3 545 aa18.79■□□□□ 0.6
ATG4C-205ENST00000443289 IL31RAQ8NI17 732 aa18.79■□□□□ 0.6
ATG4C-205ENST00000443289 PPTC7Q8NI37 304 aa18.79■□□□□ 0.6
ATG4C-205ENST00000443289 KCNB2Q92953 911 aa18.79■□□□□ 0.6
ATG4C-205ENST00000443289 PIK3CDO00329 1044 aa18.78■□□□□ 0.6
ATG4C-205ENST00000443289 CCL23P55773 120 aa18.78■□□□□ 0.6
ATG4C-205ENST00000443289 TMTC3Q6ZXV5 915 aa18.78■□□□□ 0.6
ATG4C-205ENST00000443289 ZNF365Q70YC5 407 aa18.78■□□□□ 0.6
ATG4C-205ENST00000443289 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
ATG4C-205ENST00000443289 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
ATG4C-205ENST00000443289 CMTR1Q8N1G2 835 aaKnown RBP18.78■□□□□ 0.6
ATG4C-205ENST00000443289 SMARCC2Q8TAQ2 1214 aa18.78■□□□□ 0.6
ATG4C-205ENST00000443289 KIAA1217Q5T5P2 1943 aa18.78■□□□□ 0.6
ATG4C-205ENST00000443289 FRMPD4Q14CM0 1322 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 UMODL1Q5DID0 1318 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 ACRP10323 421 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 CYP2C9P11712 490 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 GNPTABQ3T906 1256 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 CELF3Q5SZQ8 465 aaKnown RBP18.77■□□□□ 0.6
ATG4C-205ENST00000443289 MYSM1Q5VVJ2 828 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 XRRA1Q6P2D8 792 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 APOA5Q6Q788 366 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 RAB11FIP4Q86YS3 637 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 KATNAL1Q9BW62 490 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 MTIF3Q9H2K0 278 aaKnown RBP18.77■□□□□ 0.6
ATG4C-205ENST00000443289 RBM28Q9NW13 759 aaKnown RBP18.77■□□□□ 0.6
ATG4C-205ENST00000443289 STXBP5LQ9Y2K9 1186 aa18.77■□□□□ 0.6
ATG4C-205ENST00000443289 MEIS2O14770 477 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 EPB41L2O43491 1005 aaKnown RBP18.76■□□□□ 0.59
ATG4C-205ENST00000443289 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 GGPS1O95749 300 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 FGBP02675 491 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 CHMP4BP1P59074 171 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 RASIP1Q5U651 963 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 USP17L6PQ6QN14 398 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 SESTD1Q86VW0 696 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 CCDC82Q8N4S0 544 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 HERVK_113Q902F9 699 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 KAT2BQ92831 832 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 WNT8AQ9H1J5 351 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 SEMA6BQ9H3T3 888 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 PSTPIP2Q9H939 334 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 NOD1Q9Y239 953 aa18.76■□□□□ 0.59
ATG4C-205ENST00000443289 TMEM265A0A087WTH1 108 aa18.75■□□□□ 0.59
ATG4C-205ENST00000443289 ZBTB43O43298 467 aa18.75■□□□□ 0.59
ATG4C-205ENST00000443289 HOXD8P13378 290 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms