RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
HMGN1-208ENST00000443046 ZNF543Q08ER8 600 aa16.94■□□□□ 0.3
HMGN1-208ENST00000443046 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-208ENST00000443046 TRIM71Q2Q1W2 868 aaKnown RBP16.94■□□□□ 0.3
HMGN1-208ENST00000443046 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-208ENST00000443046 EFCAB14O75071 495 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 GH1P01241 217 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 MBTPS1Q14703 1052 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 LY6KQ17RY6 165 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 TTC14Q96N46 770 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 HDAC6Q9UBN7 1215 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 RCAN3Q9UKA8 241 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 MTUS1Q9ULD2 1270 aa16.93■□□□□ 0.3
HMGN1-208ENST00000443046 USP34Q70CQ2 3546 aa16.92■□□□□ 0.3
HMGN1-208ENST00000443046 HAS3O00219 553 aa16.92■□□□□ 0.3
HMGN1-208ENST00000443046 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
HMGN1-208ENST00000443046 IKBKEQ14164 716 aa16.92■□□□□ 0.3
HMGN1-208ENST00000443046 MIER1Q8N108 512 aa16.92■□□□□ 0.3
HMGN1-208ENST00000443046 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
HMGN1-208ENST00000443046 EMID1Q96A84 441 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-208ENST00000443046 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
HMGN1-208ENST00000443046 MICAL3Q7RTP6 2002 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 GRXCR2A6NFK2 248 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 FGAP02671 866 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 IL9P15248 144 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 KCNA5P22460 613 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 CHMP4BP1P59074 171 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 HTRA4P83105 476 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-208ENST00000443046 PTK7Q13308 1070 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 NEK9Q8TD19 979 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-208ENST00000443046 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-208ENST00000443046 WNT8BQ93098 351 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 TAAR1Q96RJ0 339 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 IWS1Q96ST2 819 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 COL20A1Q9P218 1284 aa16.91■□□□□ 0.3
HMGN1-208ENST00000443046 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
HMGN1-208ENST00000443046 RBAK-RBAKDNI3L0D1 243 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 F2P00734 622 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 HOXD8P13378 290 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-208ENST00000443046 ALADP13716 330 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 COL19A1Q14993 1142 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 DGKDQ16760 1214 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 ZNF618Q5T7W0 954 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 PTCRAQ6ISU1 281 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-208ENST00000443046 SEPT14Q6ZU15 432 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 ALYREFQ86V81 257 aaKnown RBP16.9■□□□□ 0.3
HMGN1-208ENST00000443046 NSUN6Q8TEA1 469 aaKnown RBP16.9■□□□□ 0.3
HMGN1-208ENST00000443046 C17orf80Q9BSJ5 609 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 INSL6Q9Y581 213 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 ZMYM6O95789 1325 aa16.9■□□□□ 0.3
HMGN1-208ENST00000443046 POTEB3A0JP26 581 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 MX1P20591 662 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 PSEN2P49810 448 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 STXBP2Q15833 593 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 PUS10Q3MIT2 529 aaKnown RBP16.89■□□□□ 0.29
HMGN1-208ENST00000443046 USH1GQ495M9 461 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.29
HMGN1-208ENST00000443046 POTEBQ6S5H4 581 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.89■□□□□ 0.291e-8■■■□□ 16.2
HMGN1-208ENST00000443046 C7orf31Q8N865 590 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 MRPL38Q96DV4 380 aaKnown RBP16.89■□□□□ 0.29
HMGN1-208ENST00000443046 MYH7BA7E2Y1 1941 aa16.89■□□□□ 0.29
HMGN1-208ENST00000443046 ZNF318Q5VUA4 2279 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 LGR5O75473 907 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 HIC1Q14526 733 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 MFSD10Q14728 455 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 KIAA0753Q2KHM9 967 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
HMGN1-208ENST00000443046 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 FBXO22Q8NEZ5 403 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 PPTC7Q8NI37 304 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 KATNAL1Q9BW62 490 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 CPVLQ9H3G5 476 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
HMGN1-208ENST00000443046 EIF3JO75822 258 aaKnown RBP16.87■□□□□ 0.29
HMGN1-208ENST00000443046 GOLGA8HP0CJ92 632 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 PCP11498 1178 aaKnown RBP16.87■□□□□ 0.29
HMGN1-208ENST00000443046 ZNF200P98182 395 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-208ENST00000443046 LAMC2Q13753 1193 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 FAM117BQ6P1L5 589 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 EVI5LQ96CN4 794 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 RMDN3Q96TC7 470 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 ALG1Q9BT22 464 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 ABCB11O95342 1321 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 EMSYQ7Z589 1322 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 COL4A6Q14031 1691 aa16.87■□□□□ 0.29
HMGN1-208ENST00000443046 MYO7AQ13402 2215 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 HSPD1P10809 573 aaKnown RBP16.86■□□□□ 0.29
HMGN1-208ENST00000443046 SSTR3P32745 418 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-208ENST00000443046 CDC37Q16543 378 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-208ENST00000443046 EPC2Q52LR7 807 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 PLEKHG4Q58EX7 1191 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 SERINC5Q86VE9 423 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 DBF4BQ8NFT6 615 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms