RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 TCF20Q9UGU0 1960 aaKnown RBP9.75□□□□□ -0.85
TOP3B-209ENST00000442653 LCHNA4D1U4 455 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 ZNF213O14771 459 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 OPLAHO14841 1288 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 GH1P01241 217 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 POU3F3P20264 500 aaPredicted RBP9.75□□□□□ -0.85
TOP3B-209ENST00000442653 COL9A1P20849 921 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 BFSP2Q13515 415 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 QRICH1Q2TAL8 776 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 CWC27Q6UX04 472 aaKnown RBP9.75□□□□□ -0.85
TOP3B-209ENST00000442653 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 SESTD1Q86VW0 696 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 IQCA1Q86XH1 822 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
TOP3B-209ENST00000442653 NSUN6Q8TEA1 469 aaKnown RBP9.75□□□□□ -0.85
TOP3B-209ENST00000442653 ARNTL2Q8WYA1 636 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 ANKS1AQ92625 1134 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 ZSCAN10Q96SZ4 725 aaPredicted RBP9.75□□□□□ -0.85
TOP3B-209ENST00000442653 RMDN3Q96TC7 470 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 KAT14Q9H8E8 782 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 JMJD4Q9H9V9 463 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 ZSWIM5Q9P217 1185 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 ABCB11O95342 1321 aa9.75□□□□□ -0.85
TOP3B-209ENST00000442653 TRIOO75962 3097 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 KIAA1217Q5T5P2 1943 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 B4DLN1 442 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 LPXNO60711 386 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 PPP1R11O60927 126 aaPredicted RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 BAIAP3O94812 1187 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 ZNF286BP0CG31 522 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 SELPP16109 830 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 EIF2AK2P19525 551 aaKnown RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 MRPL12P52815 198 aaKnown RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 WDR5P61964 334 aaKnown RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 SKIV2LQ15477 1246 aaKnown RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 STXBP2Q15833 593 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 TCTN1Q2MV58 587 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 ASPRV1Q53RT3 343 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 CHD1LQ86WJ1 897 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 PHOSPHO2Q8TCD6 241 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 AFAP1L1Q8TED9 768 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 WNT8BQ93098 351 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 IWS1Q96ST2 819 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 IL25Q9H293 177 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 OSBPL3Q9H4L5 887 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
TOP3B-209ENST00000442653 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 COL4A4P53420 1690 aaPredicted RBP9.74□□□□□ -0.85
TOP3B-209ENST00000442653 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
TOP3B-209ENST00000442653 DHX16O60231 1041 aaKnown RBP9.73□□□□□ -0.85
TOP3B-209ENST00000442653 NBNO60934 754 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 EIF3JO75822 258 aaKnown RBP9.73□□□□□ -0.85
TOP3B-209ENST00000442653 RGS20O76081 388 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 F2P00734 622 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 IGHDP01880 384 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 PARP1P09874 1014 aaKnown RBP9.73□□□□□ -0.85
TOP3B-209ENST00000442653 DEFB103AP81534 67 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 NUCB1Q02818 461 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 RBL2Q08999 1139 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 GRB10Q13322 594 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 SLC35G1Q2M3R5 365 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 TRAF7Q6Q0C0 670 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 LRRC8DQ7L1W4 858 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 FBXO11Q86XK2 927 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 MCF2L2Q86YR7 1114 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 STAG2Q8N3U4 1231 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 IL27Q8NEV9 243 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 CAGE1Q8TC20 777 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 EMID1Q96A84 441 aaPredicted RBP9.73□□□□□ -0.85
TOP3B-209ENST00000442653 MAF1Q9H063 256 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 PXMP2Q9NR77 195 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 DIAPH3Q9NSV4 1193 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 HDAC6Q9UBN7 1215 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 GTF2IRD1Q9UHL9 959 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 MYH6P13533 1939 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 C5orf42Q9H799 3197 aa9.73□□□□□ -0.85
TOP3B-209ENST00000442653 HAS3O00219 553 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 TLL1O43897 1013 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 SORBS3O60504 671 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 CFBP00751 764 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 CXCL10P02778 98 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 NR3C2P08235 984 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 CKBP12277 381 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 HOXD8P13378 290 aaPredicted RBP9.72□□□□□ -0.85
TOP3B-209ENST00000442653 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
TOP3B-209ENST00000442653 HOXA13P31271 388 aaPredicted RBP9.72□□□□□ -0.85
TOP3B-209ENST00000442653 KCNJ6P48051 423 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 PSEN2P49810 448 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 NT5C2P49902 561 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 HSD17B4P51659 736 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 ZNF200P98182 395 aaPredicted RBP9.72□□□□□ -0.85
TOP3B-209ENST00000442653 GHRHRQ02643 423 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 HIC1Q14526 733 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 MBTPS1Q14703 1052 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 DGKDQ16760 1214 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 TRIM71Q2Q1W2 868 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms