RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 RXRAP19793 462 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 KIF5BP33176 963 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 RAB11FIP4Q86YS3 637 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 IL31RAQ8NI17 732 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 TMEM87BQ96K49 555 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 MTA3Q9BTC8 594 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 WNT8AQ9H1J5 351 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 IL23AQ9NPF7 189 aa24.14■■□□□ 1.45
GCFC2-204ENST00000442309 DDX41Q9UJV9 622 aaKnown RBP24.14■■□□□ 1.45
GCFC2-204ENST00000442309 SUPT20HL2P0C7V6 817 aa24.13■■□□□ 1.45
GCFC2-204ENST00000442309 PGM5Q15124 567 aa24.13■■□□□ 1.45
GCFC2-204ENST00000442309 SAMD3Q8N6K7 520 aa24.13■■□□□ 1.45
GCFC2-204ENST00000442309 ZFP91Q96JP5 570 aaPredicted RBP24.13■■□□□ 1.45
GCFC2-204ENST00000442309 MAP3K14Q99558 947 aa24.13■■□□□ 1.45
GCFC2-204ENST00000442309 SEMA6BQ9H3T3 888 aa24.13■■□□□ 1.45
GCFC2-204ENST00000442309 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.12■■□□□ 1.45
GCFC2-204ENST00000442309 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.12■■□□□ 1.45
GCFC2-204ENST00000442309 SORBS3O60504 671 aa24.12■■□□□ 1.45
GCFC2-204ENST00000442309 PLEKHA8P1O95397 391 aa24.12■■□□□ 1.45
GCFC2-204ENST00000442309 NFRKBQ6P4R8 1299 aa24.12■■□□□ 1.45
GCFC2-204ENST00000442309 SLC17A8Q8NDX2 589 aa24.12■■□□□ 1.45
GCFC2-204ENST00000442309 RRP36Q96EU6 259 aaKnown RBP24.12■■□□□ 1.45
GCFC2-204ENST00000442309 SCLYQ96I15 445 aa24.12■■□□□ 1.45
GCFC2-204ENST00000442309 SPZ1Q9BXG8 430 aa24.12■■□□□ 1.45
GCFC2-204ENST00000442309 TTYH1Q9H313 450 aaPredicted RBP24.12■■□□□ 1.45
GCFC2-204ENST00000442309 MYH7BA7E2Y1 1941 aa24.12■■□□□ 1.45
GCFC2-204ENST00000442309 CCND2P30279 289 aa24.11■■□□□ 1.45
GCFC2-204ENST00000442309 CMTR1Q8N1G2 835 aaKnown RBP24.11■■□□□ 1.45
GCFC2-204ENST00000442309 TMTC2Q8N394 836 aa24.11■■□□□ 1.45
GCFC2-204ENST00000442309 SEC63Q9UGP8 760 aaKnown RBP24.11■■□□□ 1.45
GCFC2-204ENST00000442309 CDH23Q9H251 3354 aa24.1■■□□□ 1.45
GCFC2-204ENST00000442309 CDC45O75419 566 aa24.1■■□□□ 1.45
GCFC2-204ENST00000442309 RGS20O76081 388 aa24.1■■□□□ 1.45
GCFC2-204ENST00000442309 CASTP20810 708 aaKnown RBP24.1■■□□□ 1.45
GCFC2-204ENST00000442309 LIFRP42702 1097 aa24.1■■□□□ 1.45
GCFC2-204ENST00000442309 RNF20Q5VTR2 975 aa24.1■■□□□ 1.45
GCFC2-204ENST00000442309 VSIG10LQ86VR7 867 aa24.1■■□□□ 1.45
GCFC2-204ENST00000442309 DHX37Q8IY37 1157 aaKnown RBP24.1■■□□□ 1.45
GCFC2-204ENST00000442309 CDX2Q99626 313 aaPredicted RBP24.1■■□□□ 1.45
GCFC2-204ENST00000442309 SLC12A7Q9Y666 1083 aa24.1■■□□□ 1.45
GCFC2-204ENST00000442309 GRXCR1A8MXD5 290 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 FGBP02675 491 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 DNAJB2P25686 324 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 GNAQP50148 359 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 LAMC2Q13753 1193 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 DGKDQ16760 1214 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 RASIP1Q5U651 963 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 OTOP2Q7RTS6 562 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 SRBD1Q8N5C6 995 aaKnown RBP24.09■■□□□ 1.45
GCFC2-204ENST00000442309 CCDC136Q96JN2 1154 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 LZTS2Q9BRK4 669 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 NOD1Q9Y239 953 aa24.09■■□□□ 1.45
GCFC2-204ENST00000442309 CALM1P0DP23 149 aa24.08■■□□□ 1.45
GCFC2-204ENST00000442309 CALM2P0DP24 149 aa24.08■■□□□ 1.45
GCFC2-204ENST00000442309 CALM3P0DP25 149 aa24.08■■□□□ 1.45
GCFC2-204ENST00000442309 PTPN11Q06124 597 aaPredicted RBP24.08■■□□□ 1.45
GCFC2-204ENST00000442309 HERVK_113Q902F9 699 aa24.08■■□□□ 1.45
GCFC2-204ENST00000442309 KAT2BQ92831 832 aa24.08■■□□□ 1.45
GCFC2-204ENST00000442309 GPKOWQ92917 476 aaPredicted RBP eCLIP24.08■■□□□ 1.45
GCFC2-204ENST00000442309 EMID1Q96A84 441 aaPredicted RBP24.08■■□□□ 1.45
GCFC2-204ENST00000442309 CXXC1Q9P0U4 656 aaPredicted RBP24.08■■□□□ 1.45
GCFC2-204ENST00000442309 SCN5AQ14524 2016 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 ZNF286BP0CG31 522 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 SMARCA1P28370 1054 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 PBX2P40425 430 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 DEFB128Q7Z7B8 93 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 MICU3Q86XE3 530 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 RPUSD2Q8IZ73 545 aaKnown RBP24.07■■□□□ 1.44
GCFC2-204ENST00000442309 CCDC82Q8N4S0 544 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 PPTC7Q8NI37 304 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 SMARCC2Q8TAQ2 1214 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 MYLIPQ8WY64 445 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 TIFAQ96CG3 184 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 NEK1Q96PY6 1258 aa24.07■■□□□ 1.44
GCFC2-204ENST00000442309 MTIF3Q9H2K0 278 aaKnown RBP24.07■■□□□ 1.44
GCFC2-204ENST00000442309 hCG_1642624A0A1W2PR95 340 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 GGPS1O95749 300 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 CELF3Q5SZQ8 465 aaKnown RBP24.06■■□□□ 1.44
GCFC2-204ENST00000442309 KCNV1Q6PIU1 500 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 USP17L6PQ6QN14 398 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 CUL5Q93034 780 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 TCEANC2Q96MN5 208 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 ALG1Q9BT22 464 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 PBX4Q9BYU1 374 aa24.06■■□□□ 1.44
GCFC2-204ENST00000442309 TMEM265A0A087WTH1 108 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 UBA1P22314 1058 aaKnown RBP24.05■■□□□ 1.44
GCFC2-204ENST00000442309 PSEN2P49810 448 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 SP2Q02086 613 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 PTGISQ16647 500 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 MYSM1Q5VVJ2 828 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 GDF6Q6KF10 455 aaPredicted RBP24.05■■□□□ 1.44
GCFC2-204ENST00000442309 RASEFQ8IZ41 740 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 RETREG2Q8NC44 543 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 VWCEQ96DN2 955 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 SPATA33Q96N06 139 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 FRMPD4Q14CM0 1322 aa24.05■■□□□ 1.44
GCFC2-204ENST00000442309 ZBBXA8MT70 800 aa24.04■■□□□ 1.44
GCFC2-204ENST00000442309 MRPS9P82933 396 aaKnown RBP24.04■■□□□ 1.44
GCFC2-204ENST00000442309 MFSD10Q14728 455 aa24.04■■□□□ 1.44
GCFC2-204ENST00000442309 HSDL1Q3SXM5 330 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms