RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 NFXL1Q6ZNB6 911 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 DHX32Q7L7V1 743 aaKnown RBP12.89□□□□□ -0.35
NELFE-205ENST00000441998 HOMER1Q86YM7 354 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 PPTC7Q8NI37 304 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 NEK1Q96PY6 1258 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
NELFE-205ENST00000441998 IL23AQ9NPF7 189 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
NELFE-205ENST00000441998 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 ARIH2O95376 493 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
NELFE-205ENST00000441998 CCND2P30279 289 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 ICAM3P32942 547 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 RFC2P35250 354 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 EPHB4P54760 987 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
NELFE-205ENST00000441998 ARHGAP1Q07960 439 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 PGM5Q15124 567 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 GNPTABQ3T906 1256 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 TMEM240Q5SV17 173 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 C16orf59Q7L2K0 433 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 FANCBQ8NB91 859 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 HERVK_113Q902F9 699 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 KCNB2Q92953 911 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 TRPV6Q9H1D0 765 aa12.88□□□□□ -0.35
NELFE-205ENST00000441998 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
NELFE-205ENST00000441998 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
NELFE-205ENST00000441998 MMP3P08254 477 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 CSF2RAP15509 400 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 PSMC6P62333 389 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 FBXL16Q8N461 479 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 AFG1LQ8WV93 481 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 COPS5Q92905 334 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 CUL5Q93034 780 aa12.87□□□□□ -0.35
NELFE-205ENST00000441998 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.352e-7■■□□□ 14.2
NELFE-205ENST00000441998 MAFGO15525 162 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 RGS20O76081 388 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 FGBP02675 491 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 PTGS1P23219 599 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
NELFE-205ENST00000441998 CYP2C18P33260 490 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 BFSP2Q13515 415 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 NEDD9Q14511 834 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
NELFE-205ENST00000441998 TMTC3Q6ZXV5 915 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
NELFE-205ENST00000441998 SRBD1Q8N5C6 995 aaKnown RBP12.86□□□□□ -0.35
NELFE-205ENST00000441998 CCDC155Q8N6L0 562 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 CAGE1Q8TC20 777 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 INPP4AQ96PE3 977 aaPredicted RBP12.86□□□□□ -0.35
NELFE-205ENST00000441998 SENP7Q9BQF6 1050 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 PPP1R12CQ9BZL4 782 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
NELFE-205ENST00000441998 SPATA31C2B4DYI2 1134 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 MEIS2O14770 477 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 F2P00734 622 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 MYCLP12524 364 aaPredicted RBP12.85□□□□□ -0.35
NELFE-205ENST00000441998 RBL2Q08999 1139 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 PCNX4Q63HM2 1172 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
NELFE-205ENST00000441998 RETREG2Q8NC44 543 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
NELFE-205ENST00000441998 SMARCC2Q8TAQ2 1214 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 KAT2BQ92831 832 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 CDHR1Q96JP9 859 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 PSTPIP2Q9H939 334 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 TRMT13Q9NUP7 481 aaKnown RBP12.85□□□□□ -0.35
NELFE-205ENST00000441998 MCM3APO60318 1980 aa12.85□□□□□ -0.35
NELFE-205ENST00000441998 LTBP2Q14767 1821 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 CCDC196A0A1B0GTZ2 297 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 HAS3O00219 553 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 FIBPO43427 364 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 REC8O95072 547 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 APOA5Q6Q788 366 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 METTL7BQ6UX53 244 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 Q7L0L9 218 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 MLXIPQ9HAP2 919 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 GTF2IRD1Q9UHL9 959 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 LRRC37A2A6NM11 1700 aa12.84□□□□□ -0.35
NELFE-205ENST00000441998 ZBTB43O43298 467 aa12.83□□□□□ -0.36
NELFE-205ENST00000441998 PLEKHA8P1O95397 391 aa12.83□□□□□ -0.36
NELFE-205ENST00000441998 GGPS1O95749 300 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms