RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 INF2Q27J81 1249 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 CCDC96Q2M329 555 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 ZNF697Q5TEC3 545 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 SPATA1Q5VX52 437 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 USP17L2Q6R6M4 530 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 FILIP1Q7Z7B0 1213 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 HOMER1Q86YM7 354 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 FOXP4Q8IVH2 680 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-209ENST00000440653 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
HDAC6-209ENST00000440653 GMCL1P1Q8NEA9 526 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 MYRIPQ8NFW9 859 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 CUL5Q93034 780 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 MTMR8Q96EF0 704 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 PIGSQ96S52 555 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 ELP3Q9H9T3 547 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 RIC8AQ9NPQ8 531 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 STK17AQ9UEE5 414 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 HERC5Q9UII4 1024 aaKnown RBP10.28□□□□□ -0.76
HDAC6-209ENST00000440653 R3HCC1Q9Y3T6 440 aaKnown RBP10.28□□□□□ -0.76
HDAC6-209ENST00000440653 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 CCL15-CCL14A0A0B4J2E2 113 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 ZBTB5O15062 677 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 TLR2O60603 784 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 USP2O75604 605 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-209ENST00000440653 GNRH1P01148 92 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 UQCRHP07919 91 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 GOLGA8HP0CJ92 632 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 SKILP12757 684 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 BMP6P22004 513 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC6-209ENST00000440653 PSMC4P43686 418 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 FXR2P51116 673 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC6-209ENST00000440653 ICA1Q05084 483 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 LRMPQ12912 555 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 PAK1Q13153 545 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 AP3B2Q13367 1082 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 CUL4BQ13620 913 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 TRIM14Q14142 442 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 CCL15Q16663 113 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 FILIP1LQ4L180 1135 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 ZNF658Q5TYW1 1059 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-209ENST00000440653 RRAGBQ5VZM2 374 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 TATDN1Q6P1N9 297 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 USP49Q70CQ1 688 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 MTERF4Q7Z6M4 381 aaKnown RBP10.27□□□□□ -0.77
HDAC6-209ENST00000440653 APOBEC3FQ8IUX4 373 aaKnown RBP10.27□□□□□ -0.77
HDAC6-209ENST00000440653 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 USP38Q8NB14 1042 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 MKL1Q969V6 931 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 OPTNQ96CV9 577 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 DEFB118Q96PH6 123 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 LRRC27Q9C0I9 530 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 DEFB129Q9H1M3 183 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 NRBP1Q9UHY1 535 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 RWDD2AQ9UIY3 292 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 ITIH6Q6UXX5 1313 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 PIEZO1Q92508 2521 aa10.27□□□□□ -0.77
HDAC6-209ENST00000440653 A0A1B0GTH6 734 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 MPHOSPH10O00566 681 aaKnown RBP10.26□□□□□ -0.77
HDAC6-209ENST00000440653 PPP1R12BO60237 982 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-209ENST00000440653 CCNT1O60563 726 aaKnown RBP10.26□□□□□ -0.77
HDAC6-209ENST00000440653 AFMP43652 599 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 MRPL12P52815 198 aaKnown RBP10.26□□□□□ -0.77
HDAC6-209ENST00000440653 UBXN2AP68543 259 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 AMPD3Q01432 767 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 NFIAQ12857 509 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 CERKLQ49MI3 558 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-209ENST00000440653 COBLL1Q53SF7 1204 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 CDKAL1Q5VV42 579 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 FKBP1CQ5VVH2 108 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 PPP4R3AQ6IN85 833 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 MOXD1Q6UVY6 613 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 RASGRP4Q8TDF6 673 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 NOC3LQ8WTT2 800 aaKnown RBP10.26□□□□□ -0.77
HDAC6-209ENST00000440653 CALML4Q96GE6 196 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 DNAJC18Q9H819 358 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 FANCLQ9NW38 375 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 PAXBP1Q9Y5B6 917 aa10.26□□□□□ -0.77
HDAC6-209ENST00000440653 FRMPD2Q68DX3 1309 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-209ENST00000440653 PSMA7O14818 248 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 ARHGAP6O43182 974 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 RPN1P04843 607 aaKnown RBP10.25□□□□□ -0.77
HDAC6-209ENST00000440653 TPM1P09493 284 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 ATP1A3P13637 1013 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 CDK11BP21127 795 aaKnown RBP10.25□□□□□ -0.77
HDAC6-209ENST00000440653 RBM5P52756 815 aaKnown RBP eCLIP10.25□□□□□ -0.77
HDAC6-209ENST00000440653 CALCRLQ16602 461 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 TPD52L1Q16890 204 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-209ENST00000440653 LETM2Q2VYF4 491 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 NBPF12Q5TAG4 269 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-209ENST00000440653 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 NECAB2Q7Z6G3 386 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 CABP7Q86V35 215 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 GRAMD1CQ8IYS0 662 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms