RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 PDILTQ8N807 584 aa31.58■■■□□ 2.65
CGREF1-207ENST00000440612 CCSER1Q9C0I3 900 aa31.58■■■□□ 2.65
CGREF1-207ENST00000440612 TTC12Q9H892 705 aaPredicted RBP31.58■■■□□ 2.65
CGREF1-207ENST00000440612 PXMP2Q9NR77 195 aa31.58■■■□□ 2.65
CGREF1-207ENST00000440612 TLL2Q9Y6L7 1015 aa31.58■■■□□ 2.65
CGREF1-207ENST00000440612 MEIS1O00470 390 aa31.57■■■□□ 2.65
CGREF1-207ENST00000440612 CTAGE5O15320 804 aa31.57■■■□□ 2.65
CGREF1-207ENST00000440612 MSH4O15457 936 aa31.57■■■□□ 2.65
CGREF1-207ENST00000440612 CEP55Q53EZ4 464 aa31.57■■■□□ 2.65
CGREF1-207ENST00000440612 RGMBQ6NW40 437 aa31.57■■■□□ 2.65
CGREF1-207ENST00000440612 ZFP91Q96JP5 570 aaPredicted RBP31.57■■■□□ 2.65
CGREF1-207ENST00000440612 MMTAG2Q9BU76 263 aaKnown RBP31.57■■■□□ 2.65
CGREF1-207ENST00000440612 MRPS9P82933 396 aaKnown RBP31.57■■■□□ 2.64
CGREF1-207ENST00000440612 PDIA5Q14554 519 aa31.57■■■□□ 2.64
CGREF1-207ENST00000440612 PCNX4Q63HM2 1172 aa31.57■■■□□ 2.64
CGREF1-207ENST00000440612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.57■■■□□ 2.64
CGREF1-207ENST00000440612 RMDN3Q96TC7 470 aa31.57■■■□□ 2.64
CGREF1-207ENST00000440612 PDCD2LQ9BRP1 358 aa31.57■■■□□ 2.64
CGREF1-207ENST00000440612 ITGB5P18084 799 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 ZNF76P36508 570 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 PGM5Q15124 567 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 UIMC1Q96RL1 719 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 SDF4Q9BRK5 362 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 FBXO40Q9UH90 709 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 SERTAD1Q9UHV2 236 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 LCTP09848 1927 aa31.56■■■□□ 2.64
CGREF1-207ENST00000440612 FSD2A1L4K1 749 aa31.55■■■□□ 2.64
CGREF1-207ENST00000440612 ERCC3P19447 782 aa31.55■■■□□ 2.64
CGREF1-207ENST00000440612 EIF2AK2P19525 551 aaKnown RBP31.55■■■□□ 2.64
CGREF1-207ENST00000440612 MDM2Q00987 491 aaPredicted RBP31.55■■■□□ 2.64
CGREF1-207ENST00000440612 SPIRE1Q08AE8 756 aa31.55■■■□□ 2.64
CGREF1-207ENST00000440612 ELOA2Q8IYF1 753 aaPredicted RBP31.55■■■□□ 2.64
CGREF1-207ENST00000440612 SLC10A3P09131 477 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 SLFN12Q8IYM2 578 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 GTF3C2Q8WUA4 911 aaPredicted RBP31.54■■■□□ 2.64
CGREF1-207ENST00000440612 MXRA8Q9BRK3 442 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 PCDHA12Q9UN75 941 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 UBIAD1Q9Y5Z9 338 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 ASTN1O14525 1302 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 POTEMA6NI47 508 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 FAM155AB1AL88 458 aaPredicted RBP31.54■■■□□ 2.64
CGREF1-207ENST00000440612 SLC25A27O95847 323 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 ERVK-9P63128 1117 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 ERVK-24P63145 666 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 KARSQ15046 597 aaKnown RBP31.54■■■□□ 2.64
CGREF1-207ENST00000440612 NCAPG2Q86XI2 1143 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 LRRC15Q8TF66 581 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 ERCC4Q92889 916 aaPredicted RBP31.54■■■□□ 2.64
CGREF1-207ENST00000440612 FAM20AQ96MK3 541 aa31.54■■■□□ 2.64
CGREF1-207ENST00000440612 FOXN1O15353 648 aa31.53■■■□□ 2.64
CGREF1-207ENST00000440612 TOMM70O94826 608 aa31.53■■■□□ 2.64
CGREF1-207ENST00000440612 PLA2G4DQ86XP0 818 aa31.53■■■□□ 2.64
CGREF1-207ENST00000440612 CNNM3Q8NE01 707 aa31.53■■■□□ 2.64
CGREF1-207ENST00000440612 DHX58Q96C10 678 aa31.53■■■□□ 2.64
CGREF1-207ENST00000440612 LRWD1Q9UFC0 647 aa31.53■■■□□ 2.64
CGREF1-207ENST00000440612 ARP10275 920 aa31.52■■■□□ 2.64
CGREF1-207ENST00000440612 UBA7P41226 1012 aa31.52■■■□□ 2.64
CGREF1-207ENST00000440612 TMEM266Q2M3C6 531 aa31.52■■■□□ 2.64
CGREF1-207ENST00000440612 NAALADL2Q58DX5 795 aa31.52■■■□□ 2.64
CGREF1-207ENST00000440612 SLFN14P0C7P3 912 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 ARHGEF16Q5VV41 709 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 PDXDC2PQ6P474 469 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 NIPA1Q7RTP0 329 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 SH3RF1Q7Z6J0 888 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 VSIG10LQ86VR7 867 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 SLC5A5Q92911 643 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 NUDT12Q9BQG2 462 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 DISC1Q9NRI5 854 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 VAV3Q9UKW4 847 aa31.51■■■□□ 2.64
CGREF1-207ENST00000440612 BCRP11274 1271 aa31.51■■■□□ 2.63
CGREF1-207ENST00000440612 CABP7Q86V35 215 aa31.51■■■□□ 2.63
CGREF1-207ENST00000440612 ANKRD35Q8N283 1001 aa31.51■■■□□ 2.63
CGREF1-207ENST00000440612 SMCR8Q8TEV9 937 aaPredicted RBP31.51■■■□□ 2.63
CGREF1-207ENST00000440612 MORF4L1Q9UBU8 362 aa31.51■■■□□ 2.63
CGREF1-207ENST00000440612 PFASO15067 1338 aa31.5■■■□□ 2.63
CGREF1-207ENST00000440612 IGF2BP3O00425 579 aaKnown RBP eCLIP31.5■■■□□ 2.63
CGREF1-207ENST00000440612 COPB2P35606 906 aa31.5■■■□□ 2.63
CGREF1-207ENST00000440612 CNTN2Q02246 1040 aa31.5■■■□□ 2.63
CGREF1-207ENST00000440612 NSUN6Q8TEA1 469 aaKnown RBP31.5■■■□□ 2.63
CGREF1-207ENST00000440612 KIAA1468Q9P260 1216 aa31.5■■■□□ 2.63
CGREF1-207ENST00000440612 MANSC4A6NHS7 340 aaPredicted RBP31.49■■■□□ 2.63
CGREF1-207ENST00000440612 MARCH6O60337 910 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 NR3C2P08235 984 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 TXLNAP40222 546 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 SETQ01105 290 aaPredicted RBP31.49■■■□□ 2.63
CGREF1-207ENST00000440612 XRRA1Q6P2D8 792 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 IQUBQ8NA54 791 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 SHCBP1Q8NEM2 672 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 RAB34Q9BZG1 259 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 WDR11Q9BZH6 1224 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 PORCNQ9H237 461 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 JADE2Q9NQC1 790 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 USP25Q9UHP3 1055 aa31.49■■■□□ 2.63
CGREF1-207ENST00000440612 PSMD10O75832 226 aa31.48■■■□□ 2.63
CGREF1-207ENST00000440612 GCLCP48506 637 aaPredicted RBP31.48■■■□□ 2.63
CGREF1-207ENST00000440612 FAM133AQ8N9E0 248 aa31.48■■■□□ 2.63
CGREF1-207ENST00000440612 GPRC5AQ8NFJ5 357 aa31.48■■■□□ 2.63
CGREF1-207ENST00000440612 MTRQ99707 1265 aa31.48■■■□□ 2.63
CGREF1-207ENST00000440612 TMEM88BA6NKF7 163 aa31.48■■■□□ 2.63
CGREF1-207ENST00000440612 PNOCQ13519 176 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms