RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 LMTK3Q96Q04 1460 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 SMIM23A6NLE4 172 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 CPLX4Q7Z7G2 160 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 AMIGO3Q86WK7 504 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 KLC4Q9NSK0 619 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 EHD2Q9NZN4 543 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■■■ 29.8
PCGF3-207ENST00000440452 USO1O60763 962 aaKnown RBP13.71□□□□□ -0.21
PCGF3-207ENST00000440452 KIF4AO95239 1232 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 TDP2O95551 362 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 TCP10Q12799 353 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 KCNV1Q6PIU1 500 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 ZNF804AQ7Z570 1209 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 TNFRSF25Q93038 417 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 NHEJ1Q9H9Q4 299 aaPredicted RBP13.71□□□□□ -0.21
PCGF3-207ENST00000440452 MAD2L2Q9UI95 211 aa13.71□□□□□ -0.21
PCGF3-207ENST00000440452 ORC4O43929 436 aa13.71□□□□□ -0.22
PCGF3-207ENST00000440452 BUB1BO60566 1050 aaPredicted RBP13.71□□□□□ -0.22
PCGF3-207ENST00000440452 CDK8P49336 464 aa13.71□□□□□ -0.22
PCGF3-207ENST00000440452 KRT83P78385 493 aa13.71□□□□□ -0.22
PCGF3-207ENST00000440452 SNCBQ16143 134 aa13.71□□□□□ -0.22
PCGF3-207ENST00000440452 NAALADL2Q58DX5 795 aa13.71□□□□□ -0.22
PCGF3-207ENST00000440452 ADSSL1Q8N142 457 aa13.71□□□□□ -0.22
PCGF3-207ENST00000440452 MEFVO15553 781 aaPredicted RBP13.7□□□□□ -0.22
PCGF3-207ENST00000440452 TACC1O75410 805 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 SNAP25P60880 206 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 CALCRLQ16602 461 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 SV2BQ7L1I2 683 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 EHBP1Q8NDI1 1231 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 WDR66Q8TBY9 1149 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 PYM1Q9BRP8 204 aaKnown RBP13.7□□□□□ -0.22
PCGF3-207ENST00000440452 LRRC1Q9BTT6 524 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 MXD3Q9BW11 206 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
PCGF3-207ENST00000440452 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 GLI3P10071 1580 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 LAMB4A4D0S4 1761 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 GOLGA8KD6RF30 607 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 TRAF5O00463 557 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 KIF1CO43896 1103 aaKnown RBP13.7□□□□□ -0.22
PCGF3-207ENST00000440452 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 KCTD1Q719H9 257 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 HDAC7Q8WUI4 952 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 P2RX5Q93086 422 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 HAUS4Q9H6D7 363 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 CLTAP09496 248 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 GNA11P29992 359 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 RCAN1P53805 252 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 CACNB3P54284 484 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 PPP1R7Q15435 360 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
PCGF3-207ENST00000440452 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
PCGF3-207ENST00000440452 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 LGALS16A8MUM7 142 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 MOCS3O95396 460 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 LDHCP07864 332 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 PDHBP11177 359 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 TMEM266Q2M3C6 531 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 SWT1Q5T5J6 900 aaKnown RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 DPP8Q6V1X1 898 aaPredicted RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 IRF2BP1Q8IU81 584 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 KLHL7Q8IXQ5 586 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 TCP11Q8WWU5 503 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 CCDC51Q96ER9 411 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 DMGDHQ9UI17 866 aaKnown RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 TAF1P21675 1872 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 NCK2O43639 380 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 DNM2P50570 870 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 AMPD3Q01432 767 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 GUCY2DQ02846 1103 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 TRAPPC3LQ5T215 181 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 NFU1Q9UMS0 254 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 PARP4Q9UKK3 1724 aaKnown RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 STXBP3O00186 592 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 SATB1Q01826 763 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 TCERG1LQ5VWI1 586 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
PCGF3-207ENST00000440452 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
PCGF3-207ENST00000440452 SPEF2Q9C093 1822 aa13.68□□□□□ -0.22
PCGF3-207ENST00000440452 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
PCGF3-207ENST00000440452 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
PCGF3-207ENST00000440452 RASA1P20936 1047 aa13.68□□□□□ -0.22
PCGF3-207ENST00000440452 KRT79Q5XKE5 535 aa13.68□□□□□ -0.22
PCGF3-207ENST00000440452 ARL6IP4Q66PJ3 421 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms