RNA–Protein interactions for RNA: ENST00000440120.2

TMTC4-205, Transcript of transmembrane and tetratricopeptide repeat containing 4, human

TSL 4

Gene TMTC4, Length 584 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMTC4-205	ENST00000440120	RPGRIP1	Q96KN7	1286 aa		13.76	□□□□□ -0.21
TMTC4-205	ENST00000440120	CLEC1B	Q9P126	229 aa		13.76	□□□□□ -0.21
TMTC4-205	ENST00000440120	ISY1	Q9ULR0	285 aa	Known RBP	13.76	□□□□□ -0.21
TMTC4-205	ENST00000440120	ACACB	O00763	2458 aa		13.76	□□□□□ -0.21
TMTC4-205	ENST00000440120	IGKV6D-41	A0A0C4DH26	115 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	CHGB	P05060	677 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	BMP3	P12645	472 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	TTF1	Q15361	905 aa	Predicted RBP	13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	PTPN21	Q16825	1174 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	SMRP1	Q8NCR6	262 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	SSH3	Q8TE77	659 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	KAT2B	Q92831	832 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	RIPOR3	Q96MK2	946 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	TNN	Q9UQP3	1299 aa		13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	USP15	Q9Y4E8	981 aa	Predicted RBP	13.75	□□□□□ -0.21
TMTC4-205	ENST00000440120	ZBED9	Q6R2W3	1325 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	GOLIM4	O00461	696 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	LINC00271	P0C7V0	271 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	FDX1	P10109	184 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	ICAM3	P32942	547 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	STAT2	P52630	851 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	SLFN5	Q08AF3	891 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	BAAT	Q14032	418 aa	Predicted RBP	13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	SLFN13	Q68D06	897 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	GMCL1P1	Q8NEA9	526 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	TOP1MT	Q969P6	601 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	LMAN2L	Q9H0V9	348 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	HDAC6	Q9UBN7	1215 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	GTF2IRD1	Q9UHL9	959 aa		13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	EP300	Q09472	2414 aa	Predicted RBP	13.74	□□□□□ -0.21
TMTC4-205	ENST00000440120	C5orf67	F2Z3F1	127 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	NKRF	O15226	690 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	5e-6	■■■■□ 23
TMTC4-205	ENST00000440120	ARIH2	O95376	493 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	IK	Q13123	557 aa	Predicted RBP	13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	PTK7	Q13308	1070 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	FAM9B	Q8IZU0	186 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	AFG1L	Q8WV93	481 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	MKL1	Q969V6	931 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	CEP95	Q96GE4	821 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	DNAJC2	Q99543	621 aa	Known RBP	13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	PHF7	Q9BWX1	381 aa	Predicted RBP	13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	ADD3	Q9UEY8	706 aa	Known RBP	13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	SLC4A4	Q9Y6R1	1079 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	CFAP47	Q6ZTR5	3102 aa		13.73	□□□□□ -0.21
TMTC4-205	ENST00000440120	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	MMP3	P08254	477 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	TXN	P10599	105 aa	Known RBP	13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	ZNF200	P98182	395 aa	Predicted RBP	13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	PDE4B	Q07343	736 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	COASY	Q13057	564 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	CAMK1	Q14012	370 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	PLEKHG4	Q58EX7	1191 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	MCTP2	Q6DN12	878 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	ADGRD2	Q7Z7M1	963 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	AACS	Q86V21	672 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	SCFD2	Q8WU76	684 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	IFIH1	Q9BYX4	1025 aa	Known RBP	13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	OSBPL7	Q9BZF2	842 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	MKNK2	Q9HBH9	465 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	CCPG1	Q9ULG6	757 aa		13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	NOP58	Q9Y2X3	529 aa	Known RBP	13.72	□□□□□ -0.21
TMTC4-205	ENST00000440120	EMSY	Q7Z589	1322 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	NFIB	O00712	420 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	GLP2R	O95838	553 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	RB1	P06400	928 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	ADD2	P35612	726 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	BMPR1A	P36894	532 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	HIC1	Q14526	733 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	SLC30A10	Q6XR72	485 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	RASGRP2	Q7LDG7	609 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	FAM160B2	Q86V87	743 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	FIBCD1	Q8N539	461 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	C7orf31	Q8N865	590 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	STAG1	Q8WVM7	1258 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	DDRGK1	Q96HY6	314 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	ALG1	Q9BT22	464 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	MTMR4	Q9NYA4	1195 aa		13.71	□□□□□ -0.21
TMTC4-205	ENST00000440120	CEP250	Q9BV73	2442 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	CHD8	Q9HCK8	2581 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	PRDM1	O75626	825 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	MMP1	P03956	469 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	ATP8B2	P98198	1209 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	PDE4D	Q08499	809 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	ZBTB33	Q86T24	672 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	EFHB	Q8N7U6	833 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	CHURC1	Q8WUH1	139 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	IL17RA	Q96F46	866 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	C1orf115	Q9H7X2	142 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	PRR12	Q9ULL5	1215 aa		13.7	□□□□□ -0.22
TMTC4-205	ENST00000440120	MAP1B	P46821	2468 aa	Known RBP	13.69	□□□□□ -0.22
TMTC4-205	ENST00000440120	LOC102724159	A0A0B4J2E5	919 aa		13.69	□□□□□ -0.22
TMTC4-205	ENST00000440120	PTPDC1	A2A3K4	754 aa		13.69	□□□□□ -0.22
TMTC4-205	ENST00000440120	RSPH10B2	B2RC85	870 aa		13.69	□□□□□ -0.22
TMTC4-205	ENST00000440120	TTLL1	O95922	423 aa		13.69	□□□□□ -0.22
TMTC4-205	ENST00000440120	RSPH10B	P0C881	870 aa		13.69	□□□□□ -0.22
TMTC4-205	ENST00000440120	DNAJB1	P25685	340 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms