RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 A6NNZ2 444 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.358e-7■■□□□ 14.5
SMPD4-209ENST00000439886 MAGOHP61326 146 aaKnown RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 TNNC1P63316 161 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 STK4Q13043 487 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 ZRSR2Q15696 482 aaKnown RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 HHATQ5VTY9 493 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 MAGOHBQ96A72 148 aaKnown RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 FMN2Q9NZ56 1722 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 ANKRD33BA6NCL7 494 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 EPHB6O15197 1021 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 FSBPO95073 299 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 SRGNP10124 158 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 FNTAP49354 379 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 SMTNP53814 917 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 USP4Q13107 963 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 MGARPQ8TDB4 240 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 BICDL2A1A5D9 508 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 PDE8BO95263 885 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 FAM107AO95990 144 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 QPCTQ16769 361 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 LUC7LQ9NQ29 371 aaKnown RBP12.86□□□□□ -0.35
SMPD4-209ENST00000439886 DISC1Q9NRI5 854 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 RAD51CO43502 376 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
SMPD4-209ENST00000439886 MYBL1P10243 752 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 POLR2FP61218 127 aaKnown RBP12.85□□□□□ -0.35
SMPD4-209ENST00000439886 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
SMPD4-209ENST00000439886 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 TBC1D5Q92609 795 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
SMPD4-209ENST00000439886 ADAMTS1Q9UHI8 967 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 SALL4Q9UJQ4 1053 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 MYH15Q9Y2K3 1946 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 ADAMTS3O15072 1205 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 PPFIA2O75334 1257 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 TECP42680 631 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 PDCD2Q16342 344 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-209ENST00000439886 KDM7AQ6ZMT4 941 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 SEC16BQ96JE7 1060 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 SEPT11Q9NVA2 429 aaKnown RBP12.85□□□□□ -0.35
SMPD4-209ENST00000439886 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
SMPD4-209ENST00000439886 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 A0A1W2PQC6 194 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SKOR1P84550 965 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 PKN1Q16512 942 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 IL17AQ16552 155 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 CABP7Q86V35 215 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 PYM1Q9BRP8 204 aaKnown RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SLIT1O75093 1534 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 HMGB1P1B2RPK0 211 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 TRAF5O00463 557 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 PCCAP05165 728 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 PLCG1P19174 1290 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 TXKP42681 527 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SPTY2D1Q68D10 685 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 NELFCDQ8IXH7 590 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SHISA4Q96DD7 197 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SAAL1Q96ER3 474 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 CPVLQ9H3G5 476 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 PDS5AQ29RF7 1337 aaKnown RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 USP17L21D6R901 530 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 DNM1LO00429 736 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 OATP04181 439 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SCG2P13521 617 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SLCO1A2P46721 670 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 SPRED3Q2MJR0 410 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 MEX3CQ5U5Q3 659 aaKnown RBP12.84□□□□□ -0.35
SMPD4-209ENST00000439886 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 FUKQ8N0W3 1084 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 CCDC63Q8NA47 563 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 C3orf20Q8ND61 904 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 TLR10Q9BXR5 811 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms