RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
LMO3-207ENST00000439600 SLF1Q9BQI6 1058 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
LMO3-207ENST00000439600 SFI1A8K8P3 1242 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.41
LMO3-207ENST00000439600 FLOT1O75955 427 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 XBP1P17861 261 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 RXRAP19793 462 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 ZNF697Q5TEC3 545 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 SYDE2Q5VT97 1194 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.41
LMO3-207ENST00000439600 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 MB21D1Q8N884 522 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 NECAB1Q8N987 351 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 CAPNS2Q96L46 248 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
LMO3-207ENST00000439600 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
LMO3-207ENST00000439600 SIPA1L1O43166 1804 aa12.52□□□□□ -0.41
LMO3-207ENST00000439600 FRMPD2Q68DX3 1309 aaPredicted RBP12.52□□□□□ -0.41
LMO3-207ENST00000439600 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 FAM155AB1AL88 458 aaPredicted RBP12.51□□□□□ -0.41
LMO3-207ENST00000439600 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 BACH1O14867 736 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 DEXIO95424 95 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 CDC27P30260 824 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 NTRK3Q16288 839 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 GPAT2Q6NUI2 795 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 ADGRF4Q8IZF3 695 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 SRBD1Q8N5C6 995 aaKnown RBP12.51□□□□□ -0.41
LMO3-207ENST00000439600 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
LMO3-207ENST00000439600 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 RGS22Q8NE09 1264 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 NUP88Q99567 741 aaPredicted RBP12.51□□□□□ -0.41
LMO3-207ENST00000439600 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 NCOA5Q9HCD5 579 aaKnown RBP12.51□□□□□ -0.41
LMO3-207ENST00000439600 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 TMPRSS4Q9NRS4 437 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 PRR12Q9ULL5 1215 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
LMO3-207ENST00000439600 PDHXO00330 501 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 ZBTB5O15062 677 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 LILRA1O75019 489 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 PDCP20941 246 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
LMO3-207ENST00000439600 OAZ1P54368 228 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
LMO3-207ENST00000439600 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 CCDC12Q8WUD4 166 aaPredicted RBP12.5□□□□□ -0.41
LMO3-207ENST00000439600 BRI3BPQ8WY22 251 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 PARK7Q99497 189 aaKnown RBP12.5□□□□□ -0.41
LMO3-207ENST00000439600 MAF1Q9H063 256 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
LMO3-207ENST00000439600 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
LMO3-207ENST00000439600 WDR33Q9C0J8 1336 aaKnown RBP12.5□□□□□ -0.41
LMO3-207ENST00000439600 POLR2AP24928 1970 aaKnown RBP12.5□□□□□ -0.41
LMO3-207ENST00000439600 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 BTBD19C9JJ37 291 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 PLEKHA8P1O95397 391 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 LARGE1O95461 756 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 GNRH1P01148 92 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 COPB2P35606 906 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 SLC16A2P36021 539 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 GRM1Q13255 1194 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 MOGSQ13724 837 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 TREML2Q5T2D2 321 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 NSUN7Q8NE18 718 aaKnown RBP12.49□□□□□ -0.41
LMO3-207ENST00000439600 SNIP1Q8TAD8 396 aaKnown RBP12.49□□□□□ -0.41
LMO3-207ENST00000439600 SMARCC2Q8TAQ2 1214 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
LMO3-207ENST00000439600 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
LMO3-207ENST00000439600 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 SLC26A6Q9BXS9 759 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 ZFYVE28Q9HCC9 887 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
LMO3-207ENST00000439600 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
LMO3-207ENST00000439600 PTPDC1A2A3K4 754 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 VWA5AO00534 786 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 ATP2A1O14983 1001 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 TRIM29Q14134 588 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 PFKFB3Q16875 520 aaPredicted RBP12.48□□□□□ -0.41
LMO3-207ENST00000439600 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 FBXO11Q86XK2 927 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 SAMD3Q8N6K7 520 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms