RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DDAH1O94760 285 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 POLR2MP0CAP2 368 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 CYP2C9P11712 490 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 PTPN11Q06124 597 aaPredicted RBP23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 CREB3L3Q68CJ9 461 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 CASC1Q6TDU7 716 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 PPP1R13LQ8WUF5 828 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 HERVK_113Q902F9 699 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 EMID1Q96A84 441 aaPredicted RBP23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 VWCEQ96DN2 955 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 TMEM87BQ96K49 555 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 SPZ1Q9BXG8 430 aa23.53■■□□□ 1.36
NCKIPSD-206ENST00000439518 SH2B2O14492 632 aaPredicted RBP23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 DNAJB2P25686 324 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 PGM5Q15124 567 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 FAM47CQ5HY64 1035 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 TMTC2Q8N394 836 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 IL31RAQ8NI17 732 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 CTCFLQ8NI51 663 aaPredicted RBP23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 MYL10Q9BUA6 226 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 ANO2Q9NQ90 1003 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 MRVI1Q9Y6F6 885 aa23.52■■□□□ 1.36
NCKIPSD-206ENST00000439518 FGBP02675 491 aa23.51■■□□□ 1.35
NCKIPSD-206ENST00000439518 MYCLP12524 364 aaPredicted RBP23.51■■□□□ 1.35
NCKIPSD-206ENST00000439518 SMARCA1P28370 1054 aa23.51■■□□□ 1.35
NCKIPSD-206ENST00000439518 KIF5BP33176 963 aa23.51■■□□□ 1.35
NCKIPSD-206ENST00000439518 KAT2BQ92831 832 aa23.51■■□□□ 1.35
NCKIPSD-206ENST00000439518 LIFRP42702 1097 aa23.5■■□□□ 1.35
NCKIPSD-206ENST00000439518 FCHSD1Q86WN1 690 aa23.5■■□□□ 1.35
NCKIPSD-206ENST00000439518 PIBF1Q8WXW3 757 aa23.5■■□□□ 1.35
NCKIPSD-206ENST00000439518 SCLYQ96I15 445 aa23.5■■□□□ 1.35
NCKIPSD-206ENST00000439518 LZTS2Q9BRK4 669 aa23.5■■□□□ 1.35
NCKIPSD-206ENST00000439518 CXXC1Q9P0U4 656 aaPredicted RBP23.5■■□□□ 1.35
NCKIPSD-206ENST00000439518 CHD9Q3L8U1 2897 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 GRXCR1A8MXD5 290 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 CASTP20810 708 aaKnown RBP23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 LAMC2Q13753 1193 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 DGKDQ16760 1214 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 KCNV1Q6PIU1 500 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 NFXL1Q6ZNB6 911 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 SESTD1Q86VW0 696 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 RPUSD2Q8IZ73 545 aaKnown RBP23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 PPTC7Q8NI37 304 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 CUL9Q8IWT3 2517 aa23.49■■□□□ 1.35
NCKIPSD-206ENST00000439518 CDH23Q9H251 3354 aa23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 HOXD8P13378 290 aaPredicted RBP23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 CCND2P30279 289 aa23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 GNAQP50148 359 aa23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 OTOP2Q7RTS6 562 aa23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 DHX37Q8IY37 1157 aaKnown RBP23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 SRBD1Q8N5C6 995 aaKnown RBP23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 TIFAQ96CG3 184 aa23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 RRP36Q96EU6 259 aaKnown RBP23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 MTIF3Q9H2K0 278 aaKnown RBP23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 FRMPD4Q14CM0 1322 aa23.48■■□□□ 1.35
NCKIPSD-206ENST00000439518 CCDC69A6NI79 296 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 PITPNM1O00562 1244 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 PLEKHA8P1O95397 391 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 TGFB3P10600 412 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 PBX2P40425 430 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 SP2Q02086 613 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 MYSM1Q5VVJ2 828 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 MYLIPQ8WY64 445 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 CTAGE1Q96RT6 745 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 PBX4Q9BYU1 374 aa23.47■■□□□ 1.35
NCKIPSD-206ENST00000439518 PFKMP08237 780 aa23.46■■□□□ 1.35
NCKIPSD-206ENST00000439518 CALM1P0DP23 149 aa23.46■■□□□ 1.35
NCKIPSD-206ENST00000439518 CALM2P0DP24 149 aa23.46■■□□□ 1.35
NCKIPSD-206ENST00000439518 CALM3P0DP25 149 aa23.46■■□□□ 1.35
NCKIPSD-206ENST00000439518 CHMP4BP1P59074 171 aa23.46■■□□□ 1.35
NCKIPSD-206ENST00000439518 CELF3Q5SZQ8 465 aaKnown RBP23.46■■□□□ 1.35
NCKIPSD-206ENST00000439518 ZFP91Q96JP5 570 aaPredicted RBP23.46■■□□□ 1.35
NCKIPSD-206ENST00000439518 HAS3O00219 553 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 PPFIA4O75335 1185 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 GGPS1O95749 300 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 F2P00734 622 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 RXRAP19793 462 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 UBA1P22314 1058 aaKnown RBP23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 MRPS9P82933 396 aaKnown RBP23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 GRIN2CQ14957 1233 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 PTGISQ16647 500 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 RNF20Q5VTR2 975 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 GDF6Q6KF10 455 aaPredicted RBP23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 SGMS1Q86VZ5 419 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 GPKOWQ92917 476 aaPredicted RBP eCLIP23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 INPP4AQ96PE3 977 aaPredicted RBP23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 LRRC2Q9BYS8 371 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 ZNF576Q9H609 170 aa23.45■■□□□ 1.34
NCKIPSD-206ENST00000439518 PIK3CDO00329 1044 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 MEIS2O14770 477 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 IQCF3P0C7M6 154 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 RFC2P35250 354 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 PSEN2P49810 448 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 HSDL1Q3SXM5 330 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 CMTR1Q8N1G2 835 aaKnown RBP23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 FANCBQ8NB91 859 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 RETREG2Q8NC44 543 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 SEC63Q9UGP8 760 aaKnown RBP23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 NOD1Q9Y239 953 aa23.44■■□□□ 1.34
NCKIPSD-206ENST00000439518 SLC12A7Q9Y666 1083 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms