RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 PPM1EQ8WY54 764 aa10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 HERVK_113Q902F9 699 aa10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 MTG1Q9BT17 334 aaPredicted RBP10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 PBX4Q9BYU1 374 aa10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 VAT1LQ9HCJ6 419 aa10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 TRMT13Q9NUP7 481 aaKnown RBP10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 CXXC1Q9P0U4 656 aaPredicted RBP10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 RAD50Q92878 1312 aa10.72□□□□□ -0.69
AC011228.1-201ENST00000439027 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 TNKSO95271 1327 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 SUPT20HL2P0C7V6 817 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 TXNP10599 105 aaKnown RBP10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 CYP2C9P11712 490 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 PURAQ00577 322 aaKnown RBP10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 RAB30Q15771 203 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 CDC37Q16543 378 aaPredicted RBP10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 NBPF20Q3BBV1 942 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 DNERQ8NFT8 737 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 SCFD2Q8WU76 684 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 PPP1R13LQ8WUF5 828 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 COPS5Q92905 334 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 SCLYQ96I15 445 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 HS3ST6Q96QI5 342 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 ZSCAN10Q96SZ4 725 aaPredicted RBP10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 GAS2L1Q99501 681 aaPredicted RBP10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 UBAC1Q9BSL1 405 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 PRDM12Q9H4Q4 367 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 UPF2Q9HAU5 1272 aaKnown RBP10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 ANO2Q9NQ90 1003 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 CTNNA3Q9UI47 895 aa10.71□□□□□ -0.69
AC011228.1-201ENST00000439027 ABCB11O95342 1321 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 NKRFO15226 690 aaKnown RBP eCLIP10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 KPNA6O60684 536 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 TTLL4Q14679 1199 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 ASPRV1Q53RT3 343 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 SEPT14Q6ZU15 432 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 DEFB128Q7Z7B8 93 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 ADGRF4Q8IZF3 695 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 ENAHQ8N8S7 591 aaPredicted RBP10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 RETREG2Q8NC44 543 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 RGS22Q8NE09 1264 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 TBC1D5Q92609 795 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 TAAR1Q96RJ0 339 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 USP26Q9BXU7 913 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 KRT23Q9C075 422 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 NKX2-4Q9H2Z4 354 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 ZSWIM5Q9P217 1185 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 SLC4A7Q9Y6M7 1214 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 LCTP09848 1927 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 CHD9Q3L8U1 2897 aa10.7□□□□□ -0.7
AC011228.1-201ENST00000439027 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 IGFBP4P22692 258 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 EDNRBP24530 442 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 NT5C2P49902 561 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 RABGGTBP53611 331 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 PTH1RQ03431 593 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 QRICH1Q2TAL8 776 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 CHST3Q7LGC8 479 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 FBXO11Q86XK2 927 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 MCF2L2Q86YR7 1114 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 USP38Q8NB14 1042 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 SYTL5Q8TDW5 730 aaPredicted RBP10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 NSUN6Q8TEA1 469 aaKnown RBP10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 ANKS1AQ92625 1134 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 DSCC1Q9BVC3 393 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 LSG1Q9H089 658 aaKnown RBP10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 CNNM2Q9H8M5 875 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 SLC28A3Q9HAS3 691 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 MRPL11Q9Y3B7 192 aaKnown RBP10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 LRRC37A2A6NM11 1700 aa10.69□□□□□ -0.7
AC011228.1-201ENST00000439027 A6NJR5 290 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 ARIH2O95376 493 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 GH1P01241 217 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 CCDC85BQ15834 202 aaPredicted RBP10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 LY6KQ17RY6 165 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 IFIT1BQ5T764 474 aaKnown RBP10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 ARHGEF16Q5VV41 709 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 RMDN3Q96TC7 470 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 JMJD4Q9H9V9 463 aa10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 YBX2Q9Y2T7 364 aaKnown RBP10.68□□□□□ -0.7
AC011228.1-201ENST00000439027 CFBP00751 764 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 ACTN1P12814 892 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 MYOGP15173 224 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 ATP2A2P16615 1042 aaKnown RBP10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 EIF2AK2P19525 551 aaKnown RBP10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 TRDNQ13061 729 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 STXBP2Q15833 593 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms