RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 IPO4Q8TEX9 1081 aaKnown RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 DDX1Q92499 740 aaKnown RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 APPBP2Q92624 585 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 CRELD1Q96HD1 420 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 EAF1Q96JC9 268 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 DEPDC7Q96QD5 511 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 FAM126AQ9BYI3 521 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 PRDM14Q9GZV8 571 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZNF408Q9H9D4 720 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 CHST7Q9NS84 486 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 SIGLEC6O43699 453 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 UBOX5O94941 541 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 POU3F3P20264 500 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 EPHB1P54762 984 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 SIM2Q14190 667 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 INO80DQ53TQ3 878 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 NBPF12Q5TAG4 269 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 PPP4R4Q6NUP7 873 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 CREBRFQ8IUR6 639 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 RELL1Q8IUW5 271 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 LILRB2Q8N423 598 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 GPRASP2Q96D09 838 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 NOC4LQ9BVI4 516 aaKnown RBP4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 TNFRSF12AQ9NP84 129 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 AP5S1Q9NUS5 200 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 ERVK13-1Q9NX77 482 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 SRRDQ9UH36 339 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 FBXL21Q9UKT6 434 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 INTUQ9ULD6 942 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 FRMD4BQ9Y2L6 1034 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 PMF1-BGLAPU3KQ54 211 aa4.53□□□□□ -1.68
HMGB1P12-201ENST00000438594 PRR36Q9H6K5 1346 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 CCDC163A0A0D9SF12 145 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 A0A1W2PQ45 241 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 A0A1W2PQY0 241 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 MINDY4BA8MYZ0 360 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 KLF4O43474 513 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 KCNQ2O43526 872 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 CLEC3AO75596 197 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 ALDH1L1O75891 902 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 FSHBP01225 129 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 VDRP11473 427 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 ENDOUP21128 410 aaKnown RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 POLR2BP30876 1174 aaKnown RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 CNR2P34972 360 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 MAGEA10P43363 369 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 NR1I3Q14994 352 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 TTF1Q15361 905 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 TARBP2Q15633 366 aaKnown RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 TKFCQ3LXA3 575 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 L1TD1Q5T7N2 865 aaKnown RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 ANKS3Q6ZW76 656 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 KRT26Q7Z3Y9 468 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 LRP10Q7Z4F1 713 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 SLCO6A1Q86UG4 719 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 DRC7Q8IY82 874 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 CHPFQ8IZ52 775 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 PAF1Q8N7H5 531 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 NAT16Q8N8M0 369 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 GOLM1Q8NBJ4 401 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 FBXO27Q8NI29 283 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 CDC5LQ99459 802 aaKnown RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 GFOD1Q9NXC2 390 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 DBR1Q9UK59 544 aaKnown RBP4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 ACSL6Q9UKU0 697 aa4.52□□□□□ -1.69
HMGB1P12-201ENST00000438594 DHX16O60231 1041 aaKnown RBP4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 SCGB1D2O95969 90 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 MSL3P1P0C860 447 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 ATF3P18847 181 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 POLD1P28340 1107 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 MAPKAPK2P49137 400 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 FOXO4P98177 505 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 RAB33AQ14088 237 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 HLTFQ14527 1009 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 CBX2Q14781 532 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 BICRALQ6AI39 1079 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 LIPIQ6XZB0 460 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 C16orf86Q6ZW13 317 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 HS2ST1Q7LGA3 356 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 C14orf80Q86SX3 495 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 HOMER1Q86YM7 354 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 FTSJ3Q8IY81 847 aaKnown RBP4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 IFNL3Q8IZI9 196 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 MYRIPQ8NFW9 859 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 RASGRP4Q8TDF6 673 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 FNIP1Q8TF40 1166 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 JMJD8Q96S16 334 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 FEZ1Q99689 392 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 MKRN2Q9H000 416 aaKnown RBP4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 RSPH9Q9H1X1 276 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 PPCSQ9HAB8 311 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 AS3MTQ9HBK9 375 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 PTPRHQ9HD43 1115 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 TMEM260Q9NX78 707 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 SMPD4Q9NXE4 827 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 GGT7Q9UJ14 662 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 ATP8A1Q9Y2Q0 1164 aa4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 MRPS23Q9Y3D9 190 aaKnown RBP4.51□□□□□ -1.69
HMGB1P12-201ENST00000438594 SHTN1A0MZ66 631 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms