RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 MCM9Q9NXL9 1143 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 TMEM63CQ9P1W3 806 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 PCDHGA11Q9Y5H2 935 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 SCN9AQ15858 1988 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 NAV1Q8NEY1 1877 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 GOLGA8AA7E2F4 631 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 SFI1A8K8P3 1242 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 PRPF3O43395 683 aaKnown RBP8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 RANBP6O60518 1105 aaKnown RBP8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 DTNBO60941 627 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 DDAH1O94760 285 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 ALX3O95076 343 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 BTDP43251 543 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 NOVP48745 357 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 SSRP1Q08945 709 aaKnown RBP8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 NFIAQ12857 509 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 RTN1Q16799 776 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZSCAN23Q3MJ62 389 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 RCSD1Q6JBY9 416 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 BRAPQ7Z569 592 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 DEFB132Q7Z7B7 95 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 FERMT3Q86UX7 667 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 GAS2L3Q86XJ1 694 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 AMOTL1Q8IY63 956 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 CERS5Q8N5B7 392 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 TGFBRAP1Q8WUH2 860 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 LEO1Q8WVC0 666 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 ASIC4Q96FT7 647 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 RNF26Q9BY78 433 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 GSX2Q9BZM3 304 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 GDPD2Q9HCC8 539 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 TOMM22Q9NS69 142 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 RBM28Q9NW13 759 aaKnown RBP8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 RTEL1Q9NZ71 1219 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 NAP1L2Q9ULW6 460 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 JAG2Q9Y219 1238 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 DAGLAQ9Y4D2 1042 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 EP400Q96L91 3159 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 TNKSO95271 1327 aa8.23□□□□□ -1.09
HMGN1P6-201ENST00000438508 C10orf71Q711Q0 1435 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 SERTM1A2A2V5 107 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 DEXIO95424 95 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 CYP2D6P10635 497 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 XRCC6P12956 609 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 KCNA3P22001 575 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 U2AF2P26368 475 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 CHRNA5P30532 468 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 HIRAP54198 1017 aaPredicted RBP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 KIAA2012Q0VF49 1180 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 IFIT1BQ5T764 474 aaKnown RBP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 KRTAP5-3Q6L8H2 238 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 CAVIN1Q6NZI2 390 aaKnown RBP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 FAM173BQ6P4H8 233 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 LRSAM1Q6UWE0 723 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 OLFM4Q6UX06 510 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 C16orf86Q6ZW13 317 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 CATIPQ7Z7H3 387 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 TEX11Q8IYF3 940 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 RTKN2Q8IZC4 609 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZNF444Q8N0Y2 327 aaPredicted RBP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 TTLL6Q8N841 843 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 SPATA32Q96LK8 384 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 PSMD1Q99460 953 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZKSCAN3Q9BRR0 538 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 ALG1Q9BT22 464 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 IL17RBQ9NRM6 502 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 TFIP11Q9UBB9 837 aaKnown RBP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 MYH8P13535 1937 aa8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 DDX60LQ5H9U9 1706 aaKnown RBP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 BAZ2BQ9UIF8 2168 aaKnown RBP8.22□□□□□ -1.09
HMGN1P6-201ENST00000438508 USP17L3A6NCW0 530 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 USP17L4A6NCW7 530 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 FIBPO43427 364 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 POLR3DP05423 398 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 RASA1P20936 1047 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 SMARCA1P28370 1054 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 CDK8P49336 464 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 PLCD1P51178 756 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 TGFB2P61812 414 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 TFAP4Q01664 338 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 GABPAQ06546 454 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 DACT2Q5SW24 774 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 KRT40Q6A162 431 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 APOBEC3HQ6NTF7 200 aaKnown RBP8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 CBLL1Q75N03 491 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 USP17L1Q7RTZ2 530 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 FAM35AQ86V20 835 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 MICU3Q86XE3 530 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 FAM177A1Q8N128 213 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 MTMR14Q8NCE2 650 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 PGBD1Q96JS3 809 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 ZDHHC15Q96MV8 337 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 ZNF232Q9UNY5 417 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 MORC2Q9Y6X9 1032 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 MYO3BQ8WXR4 1341 aa8.21□□□□□ -1.1
HMGN1P6-201ENST00000438508 TSPY2A6NKD2 308 aa8.2□□□□□ -1.1
HMGN1P6-201ENST00000438508 KRTAP9-7A8MTY7 169 aa8.2□□□□□ -1.1
HMGN1P6-201ENST00000438508 PRDM1O75626 825 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms