RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 ANKS1AQ92625 1134 aa22.35■■□□□ 1.17
MUC1-211ENST00000438413 IWS1Q96ST2 819 aa22.35■■□□□ 1.17
MUC1-211ENST00000438413 ZSCAN10Q96SZ4 725 aaPredicted RBP22.35■■□□□ 1.17
MUC1-211ENST00000438413 RMDN3Q96TC7 470 aa22.35■■□□□ 1.17
MUC1-211ENST00000438413 COL4A4P53420 1690 aaPredicted RBP22.35■■□□□ 1.17
MUC1-211ENST00000438413 PRRC2BQ5JSZ5 2229 aaKnown RBP22.35■■□□□ 1.17
MUC1-211ENST00000438413 XIRP2A4UGR9 3374 aa22.35■■□□□ 1.17
MUC1-211ENST00000438413 DHX16O60231 1041 aaKnown RBP22.34■■□□□ 1.17
MUC1-211ENST00000438413 ARHGEF15O94989 841 aa22.34■■□□□ 1.17
MUC1-211ENST00000438413 BMP1P13497 986 aa22.34■■□□□ 1.17
MUC1-211ENST00000438413 CASTP20810 708 aaKnown RBP22.34■■□□□ 1.17
MUC1-211ENST00000438413 KCNJ6P48051 423 aa22.34■■□□□ 1.17
MUC1-211ENST00000438413 CWC27Q6UX04 472 aaKnown RBP22.34■■□□□ 1.17
MUC1-211ENST00000438413 FBXO11Q86XK2 927 aa22.34■■□□□ 1.17
MUC1-211ENST00000438413 ENAHQ8N8S7 591 aaPredicted RBP22.34■■□□□ 1.17
MUC1-211ENST00000438413 KAT2BQ92831 832 aa22.34■■□□□ 1.17
MUC1-211ENST00000438413 CTAGE1Q96RT6 745 aa22.34■■□□□ 1.17
MUC1-211ENST00000438413 MRPL11Q9Y3B7 192 aaKnown RBP22.34■■□□□ 1.17
MUC1-211ENST00000438413 MYH7BA7E2Y1 1941 aa22.33■■□□□ 1.17
MUC1-211ENST00000438413 PARP1P09874 1014 aaKnown RBP22.33■■□□□ 1.17
MUC1-211ENST00000438413 ARHGEF16Q5VV41 709 aa22.33■■□□□ 1.17
MUC1-211ENST00000438413 KRT40Q6A162 431 aa22.33■■□□□ 1.17
MUC1-211ENST00000438413 SMC5Q8IY18 1101 aa22.33■■□□□ 1.17
MUC1-211ENST00000438413 NECAB3Q96P71 396 aaPredicted RBP22.33■■□□□ 1.17
MUC1-211ENST00000438413 VAT1LQ9HCJ6 419 aa22.33■■□□□ 1.17
MUC1-211ENST00000438413 DIAPH3Q9NSV4 1193 aa22.33■■□□□ 1.17
MUC1-211ENST00000438413 TLL1O43897 1013 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 SELPP16109 830 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 EIF2AK2P19525 551 aaKnown RBP22.32■■□□□ 1.16
MUC1-211ENST00000438413 KCNQ1P51787 676 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 DGKDQ16760 1214 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 LRRC8DQ7L1W4 858 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 PLEKHM2Q8IWE5 1019 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 OSBPL3Q9H4L5 887 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 JMJD4Q9H9V9 463 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 ZSWIM5Q9P217 1185 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 GTF2IRD1Q9UHL9 959 aa22.32■■□□□ 1.16
MUC1-211ENST00000438413 DDX41Q9UJV9 622 aaKnown RBP22.32■■□□□ 1.16
MUC1-211ENST00000438413 CFBP00751 764 aa22.31■■□□□ 1.16
MUC1-211ENST00000438413 WDR5P61964 334 aaKnown RBP22.31■■□□□ 1.16
MUC1-211ENST00000438413 GPNMBQ14956 572 aa22.31■■□□□ 1.16
MUC1-211ENST00000438413 IMMTQ16891 758 aaKnown RBP22.31■■□□□ 1.16
MUC1-211ENST00000438413 CHD1LQ86WJ1 897 aa22.31■■□□□ 1.16
MUC1-211ENST00000438413 DHX38Q92620 1227 aaKnown RBP22.31■■□□□ 1.16
MUC1-211ENST00000438413 EMID1Q96A84 441 aaPredicted RBP22.31■■□□□ 1.16
MUC1-211ENST00000438413 MRVI1Q9Y6F6 885 aa22.31■■□□□ 1.16
MUC1-211ENST00000438413 NCOR1O75376 2440 aa22.31■■□□□ 1.16
MUC1-211ENST00000438413 BDP1A6H8Y1 2624 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 EIF3JO75822 258 aaKnown RBP22.3■■□□□ 1.16
MUC1-211ENST00000438413 PARNO95453 639 aaKnown RBP22.3■■□□□ 1.16
MUC1-211ENST00000438413 PSEN2P49810 448 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 RBL2Q08999 1139 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 CNKSR3Q6P9H4 555 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 SPRED2Q7Z698 418 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 C7orf31Q8N865 590 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 ALG1Q9BT22 464 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 DSCC1Q9BVC3 393 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 KATNAL1Q9BW62 490 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 RWDD1Q9H446 243 aaPredicted RBP22.3■■□□□ 1.16
MUC1-211ENST00000438413 PXMP2Q9NR77 195 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 HDAC6Q9UBN7 1215 aa22.3■■□□□ 1.16
MUC1-211ENST00000438413 HIP1O00291 1037 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 NR3C2P08235 984 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 CKBP12277 381 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 GRB10Q13322 594 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 AAMPQ13685 434 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 TMCO2Q7Z6W1 182 aaPredicted RBP22.29■■□□□ 1.16
MUC1-211ENST00000438413 ZBED2Q9BTP6 218 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 AMNQ9BXJ7 453 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 KRT23Q9C075 422 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 RAPGEFL1Q9UHV5 662 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 COG5Q9UP83 839 aa22.29■■□□□ 1.16
MUC1-211ENST00000438413 LCHNA4D1U4 455 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 NBNO60934 754 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 F2P00734 622 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 CXCL10P02778 98 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 ZNF286BP0CG31 522 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 HSD17B4P51659 736 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 DEFB103AP81534 67 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 LAMC2Q13753 1193 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 MFSD10Q14728 455 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 DHX37Q8IY37 1157 aaKnown RBP22.28■■□□□ 1.16
MUC1-211ENST00000438413 STAG2Q8N3U4 1231 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 UBAC1Q9BSL1 405 aa22.28■■□□□ 1.16
MUC1-211ENST00000438413 OPLAHO14841 1288 aa22.27■■□□□ 1.16
MUC1-211ENST00000438413 LPXNO60711 386 aa22.27■■□□□ 1.16
MUC1-211ENST00000438413 NUCB1Q02818 461 aa22.27■■□□□ 1.16
MUC1-211ENST00000438413 KIAA0753Q2KHM9 967 aa22.27■■□□□ 1.16
MUC1-211ENST00000438413 IFIT1BQ5T764 474 aaKnown RBP22.27■■□□□ 1.16
MUC1-211ENST00000438413 PPTC7Q8NI37 304 aa22.27■■□□□ 1.16
MUC1-211ENST00000438413 CNNM2Q9H8M5 875 aa22.27■■□□□ 1.16
MUC1-211ENST00000438413 CTNNA3Q9UI47 895 aa22.27■■□□□ 1.16
MUC1-211ENST00000438413 HAS3O00219 553 aa22.26■■□□□ 1.15
MUC1-211ENST00000438413 MYCLP12524 364 aaPredicted RBP22.26■■□□□ 1.15
MUC1-211ENST00000438413 GHRHRQ02643 423 aa22.26■■□□□ 1.15
MUC1-211ENST00000438413 PTK7Q13308 1070 aa22.26■■□□□ 1.15
MUC1-211ENST00000438413 HLA-CQ95604 372 aa22.26■■□□□ 1.15
MUC1-211ENST00000438413 PDCD2LQ9BRP1 358 aa22.26■■□□□ 1.15
MUC1-211ENST00000438413 SIP14410 1827 aa22.26■■□□□ 1.15
MUC1-211ENST00000438413 ABHD14A-ACY1A0A1B0GW23 586 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms