RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TAAR1Q96RJ0 339 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 GDF15Q99988 308 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 LAMA3Q16787 3333 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 ZBTB5O15062 677 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 DDAH1O94760 285 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 C6orf222P0C671 652 aaPredicted RBP9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 CST5P28325 142 aaPredicted RBP9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 LIFRP42702 1097 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 MAGEA10P43363 369 aaPredicted RBP9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 ACLYP53396 1101 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 NKX3-2P78367 333 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 EXOSC10Q01780 885 aaKnown RBP9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 GHRHRQ02643 423 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 KCNA10Q16322 511 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 CASC1Q6TDU7 716 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 CATIPQ7Z7H3 387 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 CMTR1Q8N1G2 835 aaKnown RBP9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 NUP133Q8WUM0 1156 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 PIBF1Q8WXW3 757 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 TMEM87BQ96K49 555 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 MTA3Q9BTC8 594 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 VTA1Q9NP79 307 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 PNMA2Q9UL42 364 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 BRPF3Q9ULD4 1205 aa9.92□□□□□ -0.82
HERPUD2-206ENST00000438224 SCN5AQ14524 2016 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 RBM47A0AV96 593 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 POM121CA8CG34 1229 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 ARIH2O95376 493 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 HOXA13P31271 388 aaPredicted RBP9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 HSPA4P34932 840 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 FXR1P51114 621 aaKnown RBP eCLIP9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 HSD17B4P51659 736 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 TNFAIP2Q03169 654 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 TLE2Q04725 743 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 APOA5Q6Q788 366 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 RNF180Q86T96 592 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 TLK2Q86UE8 772 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 SGMS1Q86VZ5 419 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 SRBD1Q8N5C6 995 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 IL31RAQ8NI17 732 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 COPS5Q92905 334 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 AMNQ9BXJ7 453 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 PDLIM7Q9NR12 457 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 ADD3Q9UEY8 706 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 ATP11BQ9Y2G3 1177 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 MRPL11Q9Y3B7 192 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 PCDHA1Q9Y5I3 950 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 SNX14Q9Y5W7 946 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 SZT2Q5T011 3432 aa9.91□□□□□ -0.82
HERPUD2-206ENST00000438224 LOC102724159A0A0B4J2E5 919 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 PNMA6FA0A0J9YX94 578 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 hCG_1642624A0A1W2PR95 340 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 CFBP00751 764 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 ASGR1P07306 291 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 ITGB8P26012 769 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 PWP2Q15269 919 aaKnown RBP9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 DUSP28Q4G0W2 176 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 GNASQ5JWF2 1037 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 C1orf53Q5VUE5 145 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 ERICH6BQ5W0A0 696 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 IQSEC1Q6DN90 963 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 POTEGQ6S5H5 508 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 NFXL1Q6ZNB6 911 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 DNERQ8NFT8 737 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 TET1Q8NFU7 2136 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 MAP3K14Q99558 947 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 TSEN34Q9BSV6 310 aaKnown RBP9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 SPZ1Q9BXG8 430 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
HERPUD2-206ENST00000438224 GRIN2DO15399 1336 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 CNTNAP5Q8WYK1 1306 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 TRIM43BA6NCK2 446 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 CCDC69A6NI79 296 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 DYNC1LI2O43237 492 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 RGS20O76081 388 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 CENPBP07199 599 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 EIF2AK2P19525 551 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 FUT2Q10981 343 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 FSCN1Q16658 493 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 CCDC62Q6P9F0 684 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 TMTC3Q6ZXV5 915 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 NOL8Q76FK4 1167 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 DHX32Q7L7V1 743 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 MICU3Q86XE3 530 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 CTCFLQ8NI51 663 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 TRIM43Q96BQ3 446 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 RMDN3Q96TC7 470 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 PXMP2Q9NR77 195 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 MYO9BQ13459 2157 aa9.89□□□□□ -0.83
HERPUD2-206ENST00000438224 WDR81Q562E7 1941 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms