RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 ST3GAL1Q11201 340 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 CCDC12Q8WUD4 166 aaPredicted RBP27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 COPS5Q92905 334 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 RTEL1Q9NZ71 1219 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 FRMPD4Q14CM0 1322 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 TXNP10599 105 aaKnown RBP27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 BEX3Q00994 111 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 DUSP28Q4G0W2 176 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 JAKMIP3Q5VZ66 844 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 FERMT2Q96AC1 680 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 SENP6Q9GZR1 1112 aaPredicted RBP27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 SPC25Q9HBM1 224 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 C6orf50Q9HD87 102 aa27.35■■□□□ 1.97
RBFOX2-209ENST00000438146 MRPS9P82933 396 aaKnown RBP27.34■■□□□ 1.97
RBFOX2-209ENST00000438146 TTLL4Q14679 1199 aa27.34■■□□□ 1.97
RBFOX2-209ENST00000438146 CCDC83Q8IWF9 413 aa27.34■■□□□ 1.97
RBFOX2-209ENST00000438146 ZMYND12Q9H0C1 365 aa27.34■■□□□ 1.97
RBFOX2-209ENST00000438146 AP5M1Q9H0R1 490 aa27.34■■□□□ 1.97
RBFOX2-209ENST00000438146 ST18O60284 1047 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 JAK2O60674 1132 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 RGS20O76081 388 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 GJA9P57773 515 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 LY6KQ17RY6 165 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 GNASQ5JWF2 1037 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 CCDC148Q8NFR7 591 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 UPF3AQ9H1J1 476 aaKnown RBP27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 ORC3Q9UBD5 711 aaPredicted RBP27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 MRVI1Q9Y6F6 885 aa27.33■■□□□ 1.97
RBFOX2-209ENST00000438146 ESYT2A0FGR8 921 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 COL6A1P12109 1028 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 NLRP5P59047 1200 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 KCNA10Q16322 511 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 KLHDC9Q8NEP7 349 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 RASGRP4Q8TDF6 673 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 ANO3Q9BYT9 981 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 GLT8D2Q9H1C3 349 aa27.32■■□□□ 1.96
RBFOX2-209ENST00000438146 STK36Q9NRP7 1315 aa27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 CTAGE5O15320 804 aa27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 SORBS3O60504 671 aa27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 ATN1P54259 1190 aaPredicted RBP27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 PCNX4Q63HM2 1172 aa27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 CCDC62Q6P9F0 684 aa27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 NSUN7Q8NE18 718 aaKnown RBP27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 OR6J1Q8NGC5 347 aa27.31■■□□□ 1.96
RBFOX2-209ENST00000438146 CD2BP2O95400 341 aaKnown RBP27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 GNA11P29992 359 aa27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 CLK2P49760 499 aaKnown RBP27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 FSCN1Q16658 493 aaKnown RBP27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 REXO1Q8N1G1 1221 aaKnown RBP27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 ZSCAN31Q96LW9 406 aaPredicted RBP27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 EHMT1Q9H9B1 1298 aa27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 SH3GLB2Q9NR46 395 aa27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 GJB4Q9NTQ9 266 aa27.3■■□□□ 1.96
RBFOX2-209ENST00000438146 FDPSP14324 419 aaKnown RBP27.29■■□□□ 1.96
RBFOX2-209ENST00000438146 FOSBP53539 338 aa27.29■■□□□ 1.96
RBFOX2-209ENST00000438146 DPF3Q92784 378 aa27.29■■□□□ 1.96
RBFOX2-209ENST00000438146 HTATIP2Q9BUP3 242 aa27.29■■□□□ 1.96
RBFOX2-209ENST00000438146 DDX41Q9UJV9 622 aaKnown RBP27.29■■□□□ 1.96
RBFOX2-209ENST00000438146 KCNJ14Q9UNX9 436 aa27.29■■□□□ 1.96
RBFOX2-209ENST00000438146 PHF24Q9UPV7 400 aa27.29■■□□□ 1.96
RBFOX2-209ENST00000438146 FOSP01100 380 aaPredicted RBP27.28■■□□□ 1.96
RBFOX2-209ENST00000438146 ACLYP53396 1101 aa27.28■■□□□ 1.96
RBFOX2-209ENST00000438146 AP3B2Q13367 1082 aa27.28■■□□□ 1.96
RBFOX2-209ENST00000438146 CCSAPQ6IQ19 270 aaPredicted RBP27.28■■□□□ 1.96
RBFOX2-209ENST00000438146 ALG1Q9BT22 464 aa27.28■■□□□ 1.96
RBFOX2-209ENST00000438146 Q9Y3F1 56 aa27.28■■□□□ 1.96
RBFOX2-209ENST00000438146 TNRC18O15417 2968 aaPredicted RBP27.27■■□□□ 1.96
RBFOX2-209ENST00000438146 NKRFO15226 690 aaKnown RBP eCLIP27.27■■□□□ 1.96
RBFOX2-209ENST00000438146 ASGR1P07306 291 aa27.27■■□□□ 1.96
RBFOX2-209ENST00000438146 CST5P28325 142 aaPredicted RBP27.27■■□□□ 1.96
RBFOX2-209ENST00000438146 GNPTABQ3T906 1256 aa27.27■■□□□ 1.96
RBFOX2-209ENST00000438146 SH2B1Q9NRF2 756 aaPredicted RBP27.27■■□□□ 1.96
RBFOX2-209ENST00000438146 A0A1W2PQ45 241 aaPredicted RBP27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 A0A1W2PQY0 241 aa27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 SP2Q02086 613 aa27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 LRRC26Q2I0M4 334 aa27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 XRRA1Q6P2D8 792 aa27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 TEX2Q8IWB9 1127 aa27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 PCSK9Q8NBP7 692 aaKnown RBP27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 BICD2Q8TD16 824 aa27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 INPP4AQ96PE3 977 aaPredicted RBP27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 TSEN34Q9BSV6 310 aaKnown RBP27.26■■□□□ 1.95
RBFOX2-209ENST00000438146 STAM2O75886 525 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 GH1P01241 217 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 ITGB5P18084 799 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 NKX3-2P78367 333 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 ARHGAP1Q07960 439 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 CXCL17Q6UXB2 119 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 WASF1Q92558 559 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 PCDHA4Q9UN74 947 aa27.25■■□□□ 1.95
RBFOX2-209ENST00000438146 MOXD2PA6NHM9 499 aa27.24■■□□□ 1.95
RBFOX2-209ENST00000438146 UBA1P22314 1058 aaKnown RBP27.24■■□□□ 1.95
RBFOX2-209ENST00000438146 SEMA3FQ13275 785 aa27.24■■□□□ 1.95
RBFOX2-209ENST00000438146 VTI1AQ96AJ9 217 aa27.24■■□□□ 1.95
RBFOX2-209ENST00000438146 KIAA1217Q5T5P2 1943 aa27.24■■□□□ 1.95
RBFOX2-209ENST00000438146 FIBPO43427 364 aa27.23■■□□□ 1.95
RBFOX2-209ENST00000438146 GGPS1O95749 300 aa27.23■■□□□ 1.95
RBFOX2-209ENST00000438146 MYL3P08590 195 aa27.23■■□□□ 1.95
RBFOX2-209ENST00000438146 SREBF1P36956 1147 aa27.23■■□□□ 1.95
RBFOX2-209ENST00000438146 CPT1AP50416 773 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms