RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CTAGE1Q96RT6 745 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 PNMA2Q9UL42 364 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 GRXCR2A6NFK2 248 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 DCXO43602 365 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 TCTN1Q2MV58 587 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 EP400NLQ6ZTU2 488 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 CHST3Q7LGC8 479 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 C17orf80Q9BSJ5 609 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 KIAA1217Q5T5P2 1943 aa16.54■□□□□ 0.24
LINC01088-201ENST00000437737 H3BQ06 376 aaPredicted RBP16.53■□□□□ 0.24
LINC01088-201ENST00000437737 GH1P01241 217 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
LINC01088-201ENST00000437737 RBL2Q08999 1139 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 PTPROQ16827 1216 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 C7orf31Q8N865 590 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 FBXL18Q96ME1 805 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 ALG1Q9BT22 464 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 TOMM22Q9NS69 142 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 CTNNA3Q9UI47 895 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 INSL6Q9Y581 213 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 MICAL3Q7RTP6 2002 aa16.53■□□□□ 0.24
LINC01088-201ENST00000437737 LY6KQ17RY6 165 aa16.52■□□□□ 0.24
LINC01088-201ENST00000437737 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.24
LINC01088-201ENST00000437737 NEK9Q8TD19 979 aa16.52■□□□□ 0.24
LINC01088-201ENST00000437737 KAT2BQ92831 832 aa16.52■□□□□ 0.24
LINC01088-201ENST00000437737 MRPL38Q96DV4 380 aaKnown RBP16.52■□□□□ 0.24
LINC01088-201ENST00000437737 KCNH6Q9H252 994 aa16.52■□□□□ 0.24
LINC01088-201ENST00000437737 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.24
LINC01088-201ENST00000437737 HDAC6Q9UBN7 1215 aa16.52■□□□□ 0.24
LINC01088-201ENST00000437737 FAM50BQ9Y247 325 aa16.52■□□□□ 0.24
LINC01088-201ENST00000437737 NLRC5Q86WI3 1866 aa16.52■□□□□ 0.23
LINC01088-201ENST00000437737 WDR19Q8NEZ3 1342 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 AMHP03971 560 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
LINC01088-201ENST00000437737 NOVP48745 357 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 ARHGAP1Q07960 439 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 DGKDQ16760 1214 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 USH1GQ495M9 461 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 TIGD5Q53EQ6 642 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 RRP12Q5JTH9 1297 aaKnown RBP16.51■□□□□ 0.23
LINC01088-201ENST00000437737 ZMYM1Q5SVZ6 1142 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 CCDC62Q6P9F0 684 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.51■□□□□ 0.233e-9■■■□□ 16.8
LINC01088-201ENST00000437737 MYOCDQ8IZQ8 938 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 TMEM47Q9BQJ4 181 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 KATNAL1Q9BW62 490 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 MYH7BA7E2Y1 1941 aa16.51■□□□□ 0.23
LINC01088-201ENST00000437737 LGR5O75473 907 aa16.5■□□□□ 0.23
LINC01088-201ENST00000437737 PSEN2P49810 448 aa16.5■□□□□ 0.23
LINC01088-201ENST00000437737 PTK7Q13308 1070 aa16.5■□□□□ 0.23
LINC01088-201ENST00000437737 ZNF618Q5T7W0 954 aa16.5■□□□□ 0.23
LINC01088-201ENST00000437737 BANK1Q8NDB2 785 aa16.5■□□□□ 0.23
LINC01088-201ENST00000437737 RBAK-RBAKDNI3L0D1 243 aa16.49■□□□□ 0.23
LINC01088-201ENST00000437737 ORC4O43929 436 aa16.49■□□□□ 0.23
LINC01088-201ENST00000437737 PDHBP11177 359 aa16.49■□□□□ 0.23
LINC01088-201ENST00000437737 MFSD10Q14728 455 aa16.49■□□□□ 0.23
LINC01088-201ENST00000437737 EPC2Q52LR7 807 aa16.49■□□□□ 0.23
LINC01088-201ENST00000437737 SAMD11Q96NU1 681 aa16.49■□□□□ 0.23
LINC01088-201ENST00000437737 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 POTEB3A0JP26 581 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 FOXP2O15409 715 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 ZNF286BP0CG31 522 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 HTRA4P83105 476 aaPredicted RBP16.48■□□□□ 0.23
LINC01088-201ENST00000437737 ZP2Q05996 745 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 GPM6BQ13491 265 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
LINC01088-201ENST00000437737 MBTPS1Q14703 1052 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 KIAA0753Q2KHM9 967 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 TCEAL5Q5H9L2 206 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 B4GALNT3Q6L9W6 998 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 POTEBQ6S5H4 581 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
LINC01088-201ENST00000437737 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
LINC01088-201ENST00000437737 WNT8BQ93098 351 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 PABPC5Q96DU9 382 aaKnown RBP16.48■□□□□ 0.23
LINC01088-201ENST00000437737 SNX27Q96L92 541 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 PRKAG3Q9UGI9 489 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 RALGAPA2Q2PPJ7 1873 aa16.48■□□□□ 0.23
LINC01088-201ENST00000437737 MYH6P13533 1939 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 ZNF200P98182 395 aaPredicted RBP16.47■□□□□ 0.23
LINC01088-201ENST00000437737 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 STXBP2Q15833 593 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 TRIM71Q2Q1W2 868 aaKnown RBP16.47■□□□□ 0.23
LINC01088-201ENST00000437737 RGS22Q8NE09 1264 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 DBF4BQ8NFT6 615 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 SP7Q8TDD2 431 aaPredicted RBP16.47■□□□□ 0.23
LINC01088-201ENST00000437737 NSUN6Q8TEA1 469 aaKnown RBP16.47■□□□□ 0.23
LINC01088-201ENST00000437737 TAAR1Q96RJ0 339 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 YME1L1Q96TA2 773 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
LINC01088-201ENST00000437737 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
LINC01088-201ENST00000437737 CLDND1Q9NY35 253 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 PCDHB15Q9Y5E8 787 aa16.47■□□□□ 0.23
LINC01088-201ENST00000437737 H3BNC9 293 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 F2P00734 622 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms