RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 USP17L1Q7RTZ2 530 aa13.69□□□□□ -0.22
TMEM116-202ENST00000437003 CCDC13Q8IYE1 715 aa13.69□□□□□ -0.22
TMEM116-202ENST00000437003 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
TMEM116-202ENST00000437003 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
TMEM116-202ENST00000437003 EPN3Q9H201 632 aa13.69□□□□□ -0.22
TMEM116-202ENST00000437003 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
TMEM116-202ENST00000437003 PPANQ9NQ55 473 aaKnown RBP13.69□□□□□ -0.22
TMEM116-202ENST00000437003 ANKIB1Q9P2G1 1089 aa13.69□□□□□ -0.22
TMEM116-202ENST00000437003 STX8Q9UNK0 236 aa13.69□□□□□ -0.22
TMEM116-202ENST00000437003 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 E7EVH7 732 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 NR1D1P20393 614 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 DTHD1Q6ZMT9 781 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 MICALCLQ6ZW33 695 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
TMEM116-202ENST00000437003 SLC44A5Q8NCS7 719 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 TRIM58Q8NG06 486 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 CCT8L2Q96SF2 557 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 TUBGCP2Q9BSJ2 902 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 EXOC1Q9NV70 894 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 RMND1Q9NWS8 449 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
TMEM116-202ENST00000437003 CALML3P27482 149 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 UBA7P41226 1012 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 NEDD9Q14511 834 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 MKNK2Q9HBH9 465 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
TMEM116-202ENST00000437003 RGL2O15211 777 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 ATP2C2O75185 946 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 PPP1R37O75864 691 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 LDHBP07195 334 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 GLI1P08151 1106 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 ELF1P32519 619 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 NF2P35240 595 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 DNM2P50570 870 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 RNASE9P60153 205 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 DDR1Q08345 913 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 PTGISQ16647 500 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 KCTD19Q17RG1 926 aaPredicted RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 CEP85LQ5SZL2 805 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 NLRP14Q86W24 1093 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 ADSSL1Q8N142 457 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 MYCBPAPQ8TBZ2 947 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 BACH1O14867 736 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 USO1O60763 962 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 EEF1GP26641 437 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 LONP1P36776 959 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 PAFAH1B1P43034 410 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 GUCY2DQ02846 1103 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 C12orf60Q5U649 245 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 RINLQ6ZS11 566 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 CSGALNACT2Q8N6G5 542 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 PYM1Q9BRP8 204 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 TTYH3Q9C0H2 523 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 VCPKMTQ9H867 229 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 EPB41L5Q9HCM4 733 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
TMEM116-202ENST00000437003 RTCBQ9Y3I0 505 aaKnown RBP13.67□□□□□ -0.22
TMEM116-202ENST00000437003 FRMD3A2A2Y4 597 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 BUB1O43683 1085 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 KIF1CO43896 1103 aaKnown RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 SRGNP10124 158 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 PDHBP11177 359 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 ERCC3P19447 782 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 TM4SF1P30408 202 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 MTIF2P46199 727 aaKnown RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 CDR1P51861 262 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 ZBED6P86452 979 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 DIXDC1Q155Q3 683 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 TRADDQ15628 312 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 NAALADL2Q58DX5 795 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 RC3H1Q5TC82 1133 aaKnown RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 MAATS1Q7Z4T9 603 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 DGKHQ86XP1 1220 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 CCDC170Q8IYT3 715 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 CCDC114Q96M63 670 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 SAP30BPQ9UHR5 308 aaKnown RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 ODF2LQ9ULJ1 636 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 HYOU1Q9Y4L1 999 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 PCDHA13Q9Y5I0 950 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 TSPY3P0CV98 308 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 TSPY8P0CW00 308 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 KDM7AQ6ZMT4 941 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 ZNF662Q6ZS27 426 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 CAVIN3Q969G5 261 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 SCLT1Q96NL6 688 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 CCDC88AQ3V6T2 1871 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 E2F5Q15329 346 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms