RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 KRT71Q3SY84 523 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 CCDC13Q8IYE1 715 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 PRKAG2Q9UGJ0 569 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 GOLGA8KD6RF30 607 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 GIMAP8Q8ND71 665 aaPredicted RBP17.3■□□□□ 0.36
PTPN13-204ENST00000436978 CDKL2Q92772 493 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 SLC12A6Q9UHW9 1150 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 MTMR6Q9Y217 621 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 PPFIA4O75335 1185 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 PSAPP07602 524 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 ANAPC5Q9UJX4 755 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 PHLPP2Q6ZVD8 1323 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 ZSCAN20P17040 1043 aaPredicted RBP17.3■□□□□ 0.36
PTPN13-204ENST00000436978 NME8Q8N427 588 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 BTBD18B2RXH4 712 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 VSIG1Q86XK7 387 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 RNF40O75150 1001 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 ANKRD20A3Q5VUR7 823 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 ELMSAN1Q6PJG2 1045 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 CLRN2A0PK11 232 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 CASQ2O14958 399 aaPredicted RBP17.29■□□□□ 0.36
PTPN13-204ENST00000436978 PSMD2Q13200 908 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 HOMER3Q9NSC5 361 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 AFPP02771 609 aaKnown RBP17.29■□□□□ 0.36
PTPN13-204ENST00000436978 APOA5Q6Q788 366 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 HAUS4Q9H6D7 363 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 FAM114A2Q9NRY5 505 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 S100BP04271 92 aaPredicted RBP17.29■□□□□ 0.36
PTPN13-204ENST00000436978 CTAGE3PQ8IX95 158 aa17.29■□□□□ 0.36
PTPN13-204ENST00000436978 STX2P32856 288 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 MASTLQ96GX5 879 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 IFNB1P01574 187 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 NLRP7Q8WX94 980 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 PALD1Q9ULE6 856 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 MMP1P03956 469 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 KRT10P13645 584 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 BFSP1Q12934 665 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 ZNF658Q5TYW1 1059 aaPredicted RBP17.28■□□□□ 0.36
PTPN13-204ENST00000436978 PNMA6FA0A0J9YX94 578 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 NR2F2P24468 414 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 COPB1P53618 953 aaKnown RBP17.28■□□□□ 0.36
PTPN13-204ENST00000436978 SEPT6Q14141 434 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 SLC39A14Q15043 492 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 PROSER3Q2NL68 480 aa17.28■□□□□ 0.36
PTPN13-204ENST00000436978 INPP5BP32019 993 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 CDC37Q16543 378 aaPredicted RBP17.27■□□□□ 0.36
PTPN13-204ENST00000436978 DCAF4Q8WV16 495 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 CCDC127Q96BQ5 260 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 MRFAP1L1Q96HT8 127 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 DBNDD1Q9H9R9 158 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 SPDYE16A6NNV3 312 aaPredicted RBP17.27■□□□□ 0.36
PTPN13-204ENST00000436978 BUB1BO60566 1050 aaPredicted RBP17.27■□□□□ 0.36
PTPN13-204ENST00000436978 KRT3P12035 628 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 SPDYE2Q495Y8 402 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 CCHCR1Q8TD31 782 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 NCAPGQ9BPX3 1015 aa17.27■□□□□ 0.36
PTPN13-204ENST00000436978 PI4K2BQ8TCG2 481 aa17.27■□□□□ 0.35
PTPN13-204ENST00000436978 PPP2R2CQ9Y2T4 447 aa17.27■□□□□ 0.35
PTPN13-204ENST00000436978 PPP4R3CPQ6ZMV5 832 aa17.27■□□□□ 0.35
PTPN13-204ENST00000436978 SH2B2O14492 632 aaPredicted RBP17.27■□□□□ 0.35
PTPN13-204ENST00000436978 RNASELQ05823 741 aaKnown RBP17.27■□□□□ 0.35
PTPN13-204ENST00000436978 LRRC8AQ8IWT6 810 aa17.27■□□□□ 0.35
PTPN13-204ENST00000436978 TUBGCP2Q9BSJ2 902 aa17.27■□□□□ 0.35
PTPN13-204ENST00000436978 NUB1Q9Y5A7 615 aa17.27■□□□□ 0.35
PTPN13-204ENST00000436978 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 ABCA9Q8IUA7 1624 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
PTPN13-204ENST00000436978 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
PTPN13-204ENST00000436978 IFRD2Q12894 506 aaPredicted RBP17.26■□□□□ 0.35
PTPN13-204ENST00000436978 SPATS2Q86XZ4 545 aaKnown RBP17.26■□□□□ 0.35
PTPN13-204ENST00000436978 TTLL6Q8N841 843 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 TTC1Q99614 292 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 GJA10Q969M2 543 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 SCYL1Q96KG9 808 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 RIPOR2Q9Y4F9 1068 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 H2AFZP0C0S5 128 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 H2AFVQ71UI9 128 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 PCK1P35558 622 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 MECOMQ03112 1051 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 PARVGQ9HBI0 331 aa17.26■□□□□ 0.35
PTPN13-204ENST00000436978 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 BUB1O43683 1085 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 HVCN1Q96D96 273 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 RWDD2AQ9UIY3 292 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 ARHGAP4P98171 946 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 CLIC6Q96NY7 704 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 EFCAB8A8MWE9 144 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 FANCLQ9NW38 375 aa17.25■□□□□ 0.35
PTPN13-204ENST00000436978 FAM186BQ8IYM0 893 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 P2RX5Q93086 422 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 CABS1Q96KC9 395 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 MYO1FO00160 1098 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms