RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 MYCLP12524 364 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-213ENST00000434795 CCL23P55773 120 aa20.7■□□□□ 0.9
CPNE1-213ENST00000434795 PGM5Q15124 567 aa20.7■□□□□ 0.9
CPNE1-213ENST00000434795 ZNF697Q5TEC3 545 aa20.7■□□□□ 0.9
CPNE1-213ENST00000434795 SRBD1Q8N5C6 995 aaKnown RBP20.7■□□□□ 0.9
CPNE1-213ENST00000434795 PPP1R13LQ8WUF5 828 aa20.7■□□□□ 0.9
CPNE1-213ENST00000434795 PIBF1Q8WXW3 757 aa20.7■□□□□ 0.9
CPNE1-213ENST00000434795 EMID1Q96A84 441 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-213ENST00000434795 LZTS2Q9BRK4 669 aa20.7■□□□□ 0.9
CPNE1-213ENST00000434795 SPZ1Q9BXG8 430 aa20.7■□□□□ 0.9
CPNE1-213ENST00000434795 TTYH1Q9H313 450 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-213ENST00000434795 FGBP02675 491 aa20.69■□□□□ 0.9
CPNE1-213ENST00000434795 MMP3P08254 477 aa20.69■□□□□ 0.9
CPNE1-213ENST00000434795 CYP2C9P11712 490 aa20.69■□□□□ 0.9
CPNE1-213ENST00000434795 KIF5BP33176 963 aa20.69■□□□□ 0.9
CPNE1-213ENST00000434795 PTPN11Q06124 597 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-213ENST00000434795 CTCFLQ8NI51 663 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-213ENST00000434795 KAT2BQ92831 832 aa20.69■□□□□ 0.9
CPNE1-213ENST00000434795 WNT8AQ9H1J5 351 aa20.69■□□□□ 0.9
CPNE1-213ENST00000434795 CCDC69A6NI79 296 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 CASTP20810 708 aaKnown RBP20.68■□□□□ 0.9
CPNE1-213ENST00000434795 GNAQP50148 359 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 EXOSC10Q01780 885 aaKnown RBP20.68■□□□□ 0.9
CPNE1-213ENST00000434795 SP2Q02086 613 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 LAMC2Q13753 1193 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 TSGA10IPQ3SY00 556 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 NFXL1Q6ZNB6 911 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 FCHSD1Q86WN1 690 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 IL31RAQ8NI17 732 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 HERVK_113Q902F9 699 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 RRP36Q96EU6 259 aaKnown RBP20.68■□□□□ 0.9
CPNE1-213ENST00000434795 MRVI1Q9Y6F6 885 aa20.68■□□□□ 0.9
CPNE1-213ENST00000434795 TGFB3P10600 412 aa20.67■□□□□ 0.9
CPNE1-213ENST00000434795 FAM47CQ5HY64 1035 aa20.67■□□□□ 0.9
CPNE1-213ENST00000434795 MYSM1Q5VVJ2 828 aa20.67■□□□□ 0.9
CPNE1-213ENST00000434795 PSRC1Q6PGN9 363 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-213ENST00000434795 KCNV1Q6PIU1 500 aa20.67■□□□□ 0.9
CPNE1-213ENST00000434795 DHX37Q8IY37 1157 aaKnown RBP20.67■□□□□ 0.9
CPNE1-213ENST00000434795 CMTR1Q8N1G2 835 aaKnown RBP20.67■□□□□ 0.9
CPNE1-213ENST00000434795 SLC17A8Q8NDX2 589 aa20.67■□□□□ 0.9
CPNE1-213ENST00000434795 ZFP91Q96JP5 570 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-213ENST00000434795 CDX2Q99626 313 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-213ENST00000434795 LRRC2Q9BYS8 371 aa20.67■□□□□ 0.9
CPNE1-213ENST00000434795 PLEKHA8P1O95397 391 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 CALM1P0DP23 149 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 CALM2P0DP24 149 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 CALM3P0DP25 149 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 DGKDQ16760 1214 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 RNF20Q5VTR2 975 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 SGMS1Q86VZ5 419 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 RASEFQ8IZ41 740 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 RPUSD2Q8IZ73 545 aaKnown RBP20.66■□□□□ 0.9
CPNE1-213ENST00000434795 FANCBQ8NB91 859 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 SCLYQ96I15 445 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 NEK1Q96PY6 1258 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 CXXC1Q9P0U4 656 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-213ENST00000434795 SLC12A7Q9Y666 1083 aa20.66■□□□□ 0.9
CPNE1-213ENST00000434795 GRXCR1A8MXD5 290 aa20.65■□□□□ 0.9
CPNE1-213ENST00000434795 PPFIA4O75335 1185 aa20.65■□□□□ 0.9
CPNE1-213ENST00000434795 RXRAP19793 462 aa20.65■□□□□ 0.9
CPNE1-213ENST00000434795 CCND2P30279 289 aa20.65■□□□□ 0.9
CPNE1-213ENST00000434795 MRPS9P82933 396 aaKnown RBP20.65■□□□□ 0.9
CPNE1-213ENST00000434795 CELF3Q5SZQ8 465 aaKnown RBP20.65■□□□□ 0.9
CPNE1-213ENST00000434795 SESTD1Q86VW0 696 aa20.65■□□□□ 0.9
CPNE1-213ENST00000434795 PPTC7Q8NI37 304 aa20.65■□□□□ 0.9
CPNE1-213ENST00000434795 GPKOWQ92917 476 aaPredicted RBP eCLIP20.65■□□□□ 0.9
CPNE1-213ENST00000434795 MYH6P13533 1939 aa20.65■□□□□ 0.9
CPNE1-213ENST00000434795 PIK3CDO00329 1044 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 MEIS2O14770 477 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 CDC45O75419 566 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 HOXD8P13378 290 aaPredicted RBP20.64■□□□□ 0.89
CPNE1-213ENST00000434795 CHMP4BP1P59074 171 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 USP17L6PQ6QN14 398 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 OTOP2Q7RTS6 562 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 CTAGE1Q96RT6 745 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 BCAS3Q9H6U6 928 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 SCN10AQ9Y5Y9 1956 aa20.64■□□□□ 0.89
CPNE1-213ENST00000434795 FRMPD4Q14CM0 1322 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 TMEM265A0A087WTH1 108 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 HAS3O00219 553 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 DNAJB2P25686 324 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 ADCK5Q3MIX3 580 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 HSDL1Q3SXM5 330 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 GDF6Q6KF10 455 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-213ENST00000434795 DHX32Q7L7V1 743 aaKnown RBP20.63■□□□□ 0.89
CPNE1-213ENST00000434795 RAB11FIP4Q86YS3 637 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
CPNE1-213ENST00000434795 SPATA31C2B4DYI2 1134 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 PITPNM1O00562 1244 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 GGPS1O95749 300 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 IQCF3P0C7M6 154 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 ICAM3P32942 547 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 PBX2P40425 430 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 PSEN2P49810 448 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 PTGISQ16647 500 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 PBX4Q9BYU1 374 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 RTEL1Q9NZ71 1219 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 HDAC6Q9UBN7 1215 aa20.62■□□□□ 0.89
CPNE1-213ENST00000434795 SEC63Q9UGP8 760 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms