RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
NUP50-210ENST00000434760 MAP3K20Q9NYL2 800 aaKnown RBP18.27■□□□□ 0.52
NUP50-210ENST00000434760 GH1P01241 217 aa18.26■□□□□ 0.51
NUP50-210ENST00000434760 PGM5Q15124 567 aa18.26■□□□□ 0.51
NUP50-210ENST00000434760 NFRKBQ6P4R8 1299 aa18.26■□□□□ 0.51
NUP50-210ENST00000434760 PSRC1Q6PGN9 363 aaPredicted RBP18.26■□□□□ 0.51
NUP50-210ENST00000434760 PPP1R13LQ8WUF5 828 aa18.26■□□□□ 0.51
NUP50-210ENST00000434760 AFG1LQ8WV93 481 aa18.26■□□□□ 0.51
NUP50-210ENST00000434760 IL23AQ9NPF7 189 aa18.26■□□□□ 0.51
NUP50-210ENST00000434760 DDX41Q9UJV9 622 aaKnown RBP18.26■□□□□ 0.51
NUP50-210ENST00000434760 CUL9Q8IWT3 2517 aa18.26■□□□□ 0.51
NUP50-210ENST00000434760 TMEM265A0A087WTH1 108 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 KPNA6O60684 536 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 EIF3JO75822 258 aaKnown RBP18.25■□□□□ 0.51
NUP50-210ENST00000434760 PLEKHA8P1O95397 391 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 ACRP10323 421 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 HOXD8P13378 290 aaPredicted RBP18.25■□□□□ 0.51
NUP50-210ENST00000434760 MCM5P33992 734 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 LIFRP42702 1097 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 NBPF20Q3BBV1 942 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
NUP50-210ENST00000434760 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 KAT2BQ92831 832 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 TMEM87BQ96K49 555 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 FAM161BQ96MY7 647 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
NUP50-210ENST00000434760 CYP2C9P11712 490 aa18.24■□□□□ 0.51
NUP50-210ENST00000434760 DNAJB2P25686 324 aa18.24■□□□□ 0.51
NUP50-210ENST00000434760 ZNF365Q70YC5 407 aa18.24■□□□□ 0.51
NUP50-210ENST00000434760 CTCFLQ8NI51 663 aaPredicted RBP18.24■□□□□ 0.51
NUP50-210ENST00000434760 CXXC1Q9P0U4 656 aaPredicted RBP18.24■□□□□ 0.51
NUP50-210ENST00000434760 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 GCOM1H8Y6P7 765 aaPredicted RBP18.23■□□□□ 0.51
NUP50-210ENST00000434760 POLR2MP0CAP2 368 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 RXRAP19793 462 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 KIF5BP33176 963 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 CCL23P55773 120 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 TRAF1Q13077 416 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 VSIG10LQ86VR7 867 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 SESTD1Q86VW0 696 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 SGMS1Q86VZ5 419 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 SRBD1Q8N5C6 995 aaKnown RBP18.23■□□□□ 0.51
NUP50-210ENST00000434760 PPTC7Q8NI37 304 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 HERVK_113Q902F9 699 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 SEMA6BQ9H3T3 888 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 MRVI1Q9Y6F6 885 aa18.23■□□□□ 0.51
NUP50-210ENST00000434760 SPTBN5Q9NRC6 3674 aaKnown RBP18.22■□□□□ 0.51
NUP50-210ENST00000434760 CDC45O75419 566 aa18.22■□□□□ 0.51
NUP50-210ENST00000434760 F2P00734 622 aa18.22■□□□□ 0.51
NUP50-210ENST00000434760 UBA1P22314 1058 aaKnown RBP18.22■□□□□ 0.51
NUP50-210ENST00000434760 SMARCA1P28370 1054 aa18.22■□□□□ 0.51
NUP50-210ENST00000434760 PTPN11Q06124 597 aaPredicted RBP18.22■□□□□ 0.51
NUP50-210ENST00000434760 FAM47CQ5HY64 1035 aa18.22■□□□□ 0.51
NUP50-210ENST00000434760 PIBF1Q8WXW3 757 aa18.22■□□□□ 0.51
NUP50-210ENST00000434760 GPKOWQ92917 476 aaPredicted RBP eCLIP18.22■□□□□ 0.51
NUP50-210ENST00000434760 SCLYQ96I15 445 aa18.22■□□□□ 0.51
NUP50-210ENST00000434760 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.21■□□□□ 0.51
NUP50-210ENST00000434760 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.21■□□□□ 0.51
NUP50-210ENST00000434760 PITPNM1O00562 1244 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 SUPT20HL2P0C7V6 817 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 ZNF286BP0CG31 522 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 MYCLP12524 364 aaPredicted RBP18.21■□□□□ 0.51
NUP50-210ENST00000434760 CCND2P30279 289 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 MRPS9P82933 396 aaKnown RBP18.21■□□□□ 0.51
NUP50-210ENST00000434760 TMTC3Q6ZXV5 915 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 RAB11FIP4Q86YS3 637 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 RASEFQ8IZ41 740 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 RRP36Q96EU6 259 aaKnown RBP18.21■□□□□ 0.51
NUP50-210ENST00000434760 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
NUP50-210ENST00000434760 PBX4Q9BYU1 374 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 SIP14410 1827 aa18.21■□□□□ 0.51
NUP50-210ENST00000434760 CCDC69A6NI79 296 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 GRXCR1A8MXD5 290 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 HAS3O00219 553 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 PIK3CDO00329 1044 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 PBX2P40425 430 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 SP2Q02086 613 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 SEMA3FQ13275 785 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 MYSM1Q5VVJ2 828 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 CMTR1Q8N1G2 835 aaKnown RBP18.2■□□□□ 0.5
NUP50-210ENST00000434760 TMTC2Q8N394 836 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 DHX38Q92620 1227 aaKnown RBP18.2■□□□□ 0.5
NUP50-210ENST00000434760 INPP4AQ96PE3 977 aaPredicted RBP18.2■□□□□ 0.5
NUP50-210ENST00000434760 LZTS2Q9BRK4 669 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 CNTNAP5Q8WYK1 1306 aa18.2■□□□□ 0.5
NUP50-210ENST00000434760 MEIS2O14770 477 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 GNAQP50148 359 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 EXOSC10Q01780 885 aaKnown RBP18.19■□□□□ 0.5
NUP50-210ENST00000434760 LAMC2Q13753 1193 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 DGKDQ16760 1214 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 HSDL1Q3SXM5 330 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 TSGA10IPQ3SY00 556 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 CELF3Q5SZQ8 465 aaKnown RBP18.19■□□□□ 0.5
NUP50-210ENST00000434760 GDF6Q6KF10 455 aaPredicted RBP18.19■□□□□ 0.5
NUP50-210ENST00000434760 APOA5Q6Q788 366 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 NFXL1Q6ZNB6 911 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 MICAL3Q7RTP6 2002 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms