RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 GCC2Q8IWJ2 1684 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 CARMIL1Q5VZK9 1371 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 RBP3P10745 1247 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 ACADSP16219 412 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 ETFBP38117 255 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 SKIV2L2P42285 1042 aaKnown RBP11.93□□□□□ -0.5
CCDC171-202ENST00000432954 DSTNP60981 165 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 DNM1Q05193 864 aaKnown RBP11.93□□□□□ -0.5
CCDC171-202ENST00000432954 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 SEPT6Q14141 434 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 KIF22Q14807 665 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 SVIPQ8NHG7 77 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 NPLOC4Q8TAT6 608 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 CDKL2Q92772 493 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 NSMCE3Q96MG7 304 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 DNAI2Q9GZS0 605 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 GRIN2BQ13224 1484 aa11.93□□□□□ -0.5
CCDC171-202ENST00000432954 ARPC4-TTLL3A0A0A6YYG9 625 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 A0A1W2PQ67 120 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 ZSCAN22P10073 491 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 HOXC13P31276 330 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 ADARP55265 1226 aaKnown RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 NMIQ13287 307 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 PDCLQ13371 301 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 PCSK7Q16549 785 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 CNPY1Q3B7I2 92 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 PPP2R2DQ66LE6 453 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 LMBRD2Q68DH5 695 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 FAM173BQ6P4H8 233 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 KDM7AQ6ZMT4 941 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 PHLDB2Q86SQ0 1253 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 TOR1AIP2Q8NFQ8 470 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 RIN2Q8WYP3 895 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 ABTB1Q969K4 478 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 MED30Q96HR3 178 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 WDR24Q96S15 920 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 SCOCQ9UIL1 159 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 SNX9Q9Y5X1 595 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 EHBP1L1Q8N3D4 1523 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 MATN2O00339 956 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 CDK2AP1O14519 115 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 PPP1R37O75864 691 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 EIF2S1P05198 315 aaKnown RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 NLRP12P59046 1061 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 GNG11P61952 73 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 GBE1Q04446 702 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 PPP1R7Q15435 360 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 SPRED3Q2MJR0 410 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 CCDC63Q8NA47 563 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 ATP8B4Q8TF62 1192 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 GLMNQ92990 594 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 FAM129AQ9BZQ8 928 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 ABCG4Q9H172 646 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 POLMQ9NP87 494 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 MOCS1Q9NZB8 636 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 DLGAP2Q9P1A6 1054 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 CRNNQ9UBG3 495 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-202ENST00000432954 NUMBLQ9Y6R0 609 aa11.92□□□□□ -0.5
CCDC171-202ENST00000432954 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC171-202ENST00000432954 KPNA6O60684 536 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 WFS1O76024 890 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 TCF3P15923 654 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 ANXA13P27216 316 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 ANKRD44Q8N8A2 993 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 BRSK1Q8TDC3 778 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 STARD8Q92502 1023 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 RPGRQ92834 1020 aaKnown RBP11.91□□□□□ -0.5
CCDC171-202ENST00000432954 ERP44Q9BS26 406 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 CEP44Q9C0F1 390 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 KLHL4Q9C0H6 718 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 DNAJC25Q9H1X3 360 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 TRPC7Q9HCX4 862 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 SAMSN1Q9NSI8 373 aaKnown RBP11.91□□□□□ -0.5
CCDC171-202ENST00000432954 EXOC7Q9UPT5 735 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 GPC6Q9Y625 555 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-202ENST00000432954 ADAMTS12P58397 1594 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 hCG_2014768A0A024R1R8 64 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-202ENST00000432954 FAM47E-STBD1D6RA91 191 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 GOLGA8TH3BQL2 631 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 AP3B1O00203 1094 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 PSMD14O00487 310 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 GOLGA8HP0CJ92 632 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 CENPAP49450 140 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 NR1D2Q14995 579 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 HDGFL2Q7Z4V5 671 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-202ENST00000432954 CCT6BQ92526 530 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 CYFIP2Q96F07 1278 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 SPATA16Q9BXB7 569 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms