RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 MARCH6O60337 910 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
DDX56-204ENST00000431640 INPP5BP32019 993 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 KLRC3Q07444 240 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 KCNJ12Q14500 433 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 SEPT2Q15019 361 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 KRT31Q15323 416 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 CNGA4Q8IV77 575 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 SULF1Q8IWU6 871 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 PLIN2Q99541 437 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 EXOC1Q9NV70 894 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 MAGEC2Q9UBF1 373 aaPredicted RBP14.37□□□□□ -0.11
DDX56-204ENST00000431640 DDX25Q9UHL0 483 aaKnown RBP14.37□□□□□ -0.11
DDX56-204ENST00000431640 GDAQ9Y2T3 454 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 PCDHA1Q9Y5I3 950 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 TEX33O43247 280 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 GH2P01242 217 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 COPB1P53618 953 aaKnown RBP14.36□□□□□ -0.11
DDX56-204ENST00000431640 PDE4DQ08499 809 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 AP3B2Q13367 1082 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 PRKG1Q13976 671 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 QRICH1Q2TAL8 776 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 MOXD1Q6UVY6 613 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 MOB2Q70IA6 237 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 TMEM139Q8IV31 216 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 FAM114A1Q8IWE2 563 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 MMTAG2Q9BU76 263 aaKnown RBP14.36□□□□□ -0.11
DDX56-204ENST00000431640 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
DDX56-204ENST00000431640 CYP3A7-CYP3A51PA0A087WV96 503 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 RAD21O60216 631 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 TDP2O95551 362 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 FOSP01100 380 aaPredicted RBP14.35□□□□□ -0.11
DDX56-204ENST00000431640 CYP3A7P24462 503 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 CCNE1P24864 410 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 CAP2P40123 477 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 ADKP55263 362 aaKnown RBP14.35□□□□□ -0.11
DDX56-204ENST00000431640 ETF1P62495 437 aaKnown RBP14.35□□□□□ -0.11
DDX56-204ENST00000431640 ASIC1P78348 528 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 PSMD2Q13200 908 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 CDC37Q16543 378 aaPredicted RBP14.35□□□□□ -0.11
DDX56-204ENST00000431640 BTNL9Q6UXG8 535 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 LDHDQ86WU2 507 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 ZNF112Q9UJU3 913 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 ZBTB21Q9ULJ3 1066 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 PCDHA12Q9UN75 941 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 STK24Q9Y6E0 443 aa14.35□□□□□ -0.11
DDX56-204ENST00000431640 KIF3CO14782 793 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 SLC37A4O43826 429 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 EDIL3O43854 480 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 BMP3P12645 472 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 RBM10P98175 930 aaKnown RBP14.34□□□□□ -0.11
DDX56-204ENST00000431640 RBL2Q08999 1139 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 GRB10Q13322 594 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 UBE2SQ16763 222 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 REXO1L1PQ8IX06 675 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 SLFN12Q8IYM2 578 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 LARP4BQ92615 738 aaKnown RBP14.34□□□□□ -0.11
DDX56-204ENST00000431640 P2RX5Q93086 422 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 CLEC11AQ9Y240 323 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 PPP2R2CQ9Y2T4 447 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 PHLPP2Q6ZVD8 1323 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 A0A1W2PQC6 194 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 A0A1W2PRG0 241 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 USP2O75604 605 aaPredicted RBP14.34□□□□□ -0.11
DDX56-204ENST00000431640 FGFR1OPO95684 399 aaKnown RBP14.34□□□□□ -0.11
DDX56-204ENST00000431640 SYDE2Q5VT97 1194 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 UNC13DQ70J99 1090 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 FBXO11Q86XK2 927 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX56-204ENST00000431640 SNX29Q8TEQ0 813 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 RAD54LQ92698 747 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 ZKSCAN4Q969J2 545 aaPredicted RBP14.34□□□□□ -0.11
DDX56-204ENST00000431640 KLRG1Q96E93 195 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 TRIM47Q96LD4 638 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 PNMA5Q96PV4 448 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 WRNIP1Q96S55 665 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 SRRTQ9BXP5 876 aaKnown RBP14.34□□□□□ -0.11
DDX56-204ENST00000431640 VPS16Q9H269 839 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
DDX56-204ENST00000431640 MAPK8IP1Q9UQF2 711 aa14.34□□□□□ -0.11
DDX56-204ENST00000431640 TMEM119Q4V9L6 283 aa14.33□□□□□ -0.12
DDX56-204ENST00000431640 HYIQ5T013 277 aa14.33□□□□□ -0.12
DDX56-204ENST00000431640 TTI2Q6NXR4 508 aa14.33□□□□□ -0.12
DDX56-204ENST00000431640 TMTC1Q8IUR5 882 aa14.33□□□□□ -0.12
DDX56-204ENST00000431640 MBOAT7Q96N66 472 aa14.33□□□□□ -0.12
DDX56-204ENST00000431640 ZNF341Q9BYN7 854 aa14.33□□□□□ -0.12
DDX56-204ENST00000431640 BLOC1S4Q9NUP1 217 aa14.33□□□□□ -0.12
DDX56-204ENST00000431640 TBX3O15119 743 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 MFAP3LO75121 409 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 NDUFB10O96000 172 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 CCDC175P0C221 793 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 CCT6AP40227 531 aaKnown RBP14.32□□□□□ -0.12
DDX56-204ENST00000431640 ECE1P42892 770 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 DNM2P50570 870 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 UBXN1Q04323 297 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 GOLGA8FQ08AF8 430 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms