RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 PGBD1Q96JS3 809 aa21.07■□□□□ 0.96
RFTN1-202ENST00000431547 PDGFCQ9NRA1 345 aa21.07■□□□□ 0.96
RFTN1-202ENST00000431547 SMC3Q9UQE7 1217 aa21.07■□□□□ 0.96
RFTN1-202ENST00000431547 CCDC85CA6NKD9 419 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 MMP1P03956 469 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 GJA8P48165 433 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 FBXO18Q8NFZ0 1043 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 RASGRP4Q8TDF6 673 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 U2AF1L4Q8WU68 220 aaKnown RBP21.06■□□□□ 0.96
RFTN1-202ENST00000431547 SCFD2Q8WU76 684 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 INTS4Q96HW7 963 aaKnown RBP21.06■□□□□ 0.96
RFTN1-202ENST00000431547 C8orf76Q96K31 380 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 CRISPLD2Q9H0B8 497 aa21.06■□□□□ 0.96
RFTN1-202ENST00000431547 RGS20O76081 388 aa21.05■□□□□ 0.96
RFTN1-202ENST00000431547 GJB2P29033 226 aa21.05■□□□□ 0.96
RFTN1-202ENST00000431547 ADCYAP1R1P41586 468 aa21.05■□□□□ 0.96
RFTN1-202ENST00000431547 TNFAIP2Q03169 654 aa21.05■□□□□ 0.96
RFTN1-202ENST00000431547 CRYGNQ8WXF5 182 aa21.05■□□□□ 0.96
RFTN1-202ENST00000431547 INPP4AQ96PE3 977 aaPredicted RBP21.05■□□□□ 0.96
RFTN1-202ENST00000431547 WDR11Q9BZH6 1224 aa21.05■□□□□ 0.96
RFTN1-202ENST00000431547 BRMS1Q9HCU9 246 aa21.05■□□□□ 0.96
RFTN1-202ENST00000431547 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.04■□□□□ 0.96
RFTN1-202ENST00000431547 DUSP11O75319 330 aaKnown RBP21.04■□□□□ 0.96
RFTN1-202ENST00000431547 CYP3A4P08684 503 aa21.04■□□□□ 0.96
RFTN1-202ENST00000431547 RARBP10826 455 aa21.04■□□□□ 0.96
RFTN1-202ENST00000431547 KRT2P35908 639 aa21.04■□□□□ 0.96
RFTN1-202ENST00000431547 SEPT14Q6ZU15 432 aa21.04■□□□□ 0.96
RFTN1-202ENST00000431547 KRT25Q7Z3Z0 450 aa21.04■□□□□ 0.96
RFTN1-202ENST00000431547 OXER1Q8TDS5 423 aa21.04■□□□□ 0.96
RFTN1-202ENST00000431547 OGDHLQ9ULD0 1010 aa21.04■□□□□ 0.96
RFTN1-202ENST00000431547 ADCY6O43306 1168 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 TGFB3P10600 412 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 SMPD1P17405 629 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 FOSBP53539 338 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 ARHGAP4P98171 946 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 TTLL4Q14679 1199 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 GNPTABQ3T906 1256 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 DUSP28Q4G0W2 176 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 CCDC62Q6P9F0 684 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 KCNV1Q6PIU1 500 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 ZFP91Q96JP5 570 aaPredicted RBP21.03■□□□□ 0.96
RFTN1-202ENST00000431547 RTEL1Q9NZ71 1219 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 GNEQ9Y223 722 aaKnown RBP21.03■□□□□ 0.96
RFTN1-202ENST00000431547 Q9Y3F1 56 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 UBIAD1Q9Y5Z9 338 aa21.03■□□□□ 0.96
RFTN1-202ENST00000431547 POTEFA5A3E0 1075 aa21.02■□□□□ 0.96
RFTN1-202ENST00000431547 NKRFO15226 690 aaKnown RBP eCLIP21.02■□□□□ 0.96
RFTN1-202ENST00000431547 TFRCP02786 760 aaKnown RBP21.02■□□□□ 0.96
RFTN1-202ENST00000431547 TXNP10599 105 aaKnown RBP21.02■□□□□ 0.96
RFTN1-202ENST00000431547 ICAM3P32942 547 aa21.02■□□□□ 0.96
RFTN1-202ENST00000431547 USP11P51784 963 aa21.02■□□□□ 0.96
RFTN1-202ENST00000431547 SAFBQ15424 915 aaKnown RBP eCLIP21.02■□□□□ 0.96
RFTN1-202ENST00000431547 ANO1Q5XXA6 986 aa21.02■□□□□ 0.96
RFTN1-202ENST00000431547 NLRX1Q86UT6 975 aa21.02■□□□□ 0.96
RFTN1-202ENST00000431547 DIS3L2Q8IYB7 885 aaKnown RBP21.02■□□□□ 0.96
RFTN1-202ENST00000431547 DDX41Q9UJV9 622 aaKnown RBP21.02■□□□□ 0.96
RFTN1-202ENST00000431547 BTBD18B2RXH4 712 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 SPATA31C2B4DYI2 1134 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 MAFGO15525 162 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 ITGB5P18084 799 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 GUCY1B3Q02153 619 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 NONOQ15233 471 aaKnown RBP eCLIP21.01■□□□□ 0.95
RFTN1-202ENST00000431547 TMEM63BQ5T3F8 832 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 TBCKQ8TEA7 893 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 TNFRSF25Q93038 417 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 GPRASP2Q96D09 838 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 MXRA8Q9BRK3 442 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 JADE2Q9NQC1 790 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 XPNPEP3Q9NQH7 507 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 MRVI1Q9Y6F6 885 aa21.01■□□□□ 0.95
RFTN1-202ENST00000431547 CCDC194A0A1B0GVG4 234 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 FIBPO43427 364 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 ARIH2O95376 493 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 CIITAP33076 1130 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 ZNF76P36508 570 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 GJA9P57773 515 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 NKX3-2P78367 333 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 NR5A1Q13285 461 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 CEP55Q53EZ4 464 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 NIPA1Q7RTP0 329 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 ARRDC4Q8NCT1 418 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 LENG1Q96BZ8 264 aaPredicted RBP21■□□□□ 0.95
RFTN1-202ENST00000431547 CDHR1Q96JP9 859 aa21■□□□□ 0.95
RFTN1-202ENST00000431547 UPF3AQ9H1J1 476 aaKnown RBP21■□□□□ 0.95
RFTN1-202ENST00000431547 MEIS1O00470 390 aa20.99■□□□□ 0.95
RFTN1-202ENST00000431547 EDIL3O43854 480 aa20.99■□□□□ 0.95
RFTN1-202ENST00000431547 EN2P19622 333 aaPredicted RBP20.99■□□□□ 0.95
RFTN1-202ENST00000431547 LY6KQ17RY6 165 aa20.99■□□□□ 0.95
RFTN1-202ENST00000431547 LARP1BQ659C4 914 aaKnown RBP20.99■□□□□ 0.95
RFTN1-202ENST00000431547 ANKLE1Q8NAG6 615 aa20.99■□□□□ 0.95
RFTN1-202ENST00000431547 AP5M1Q9H0R1 490 aa20.99■□□□□ 0.95
RFTN1-202ENST00000431547 FOXP1Q9H334 677 aaPredicted RBP20.99■□□□□ 0.95
RFTN1-202ENST00000431547 SPC25Q9HBM1 224 aa20.99■□□□□ 0.95
RFTN1-202ENST00000431547 SYNRGQ9UMZ2 1314 aa20.99■□□□□ 0.95
RFTN1-202ENST00000431547 LRRC37A2A6NM11 1700 aa20.98■□□□□ 0.95
RFTN1-202ENST00000431547 FAM86B1E9PN63 330 aa20.98■□□□□ 0.95
RFTN1-202ENST00000431547 DYNC1LI2O43237 492 aaPredicted RBP20.98■□□□□ 0.95
RFTN1-202ENST00000431547 ADAMTS4O75173 837 aa20.98■□□□□ 0.95
RFTN1-202ENST00000431547 PGK1P00558 417 aa20.98■□□□□ 0.95
RFTN1-202ENST00000431547 FAM86B2P0C5J1 330 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms