RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 SLC43A3Q8NBI5 491 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 COPS5Q92905 334 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 TRIM43Q96BQ3 446 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 TM6SF1Q9BZW5 370 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 UBE2OQ9C0C9 1292 aaKnown RBP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 PSTPIP2Q9H939 334 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 FAM217BQ9NTX9 383 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 TMEM39AQ9NV64 488 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 MRVI1Q9Y6F6 885 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 CNTNAP5Q8WYK1 1306 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 MYH6P13533 1939 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 BAZ2BQ9UIF8 2168 aaKnown RBP11.3□□□□□ -0.6
HDAC6-207ENST00000430858 hCG_1642624A0A1W2PR95 340 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 hCG_1984214I3L0E3 225 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 MEIS2O14770 477 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
HDAC6-207ENST00000430858 STAM2O75886 525 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 TGFB3P10600 412 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 CDC27P30260 824 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 FXR1P51114 621 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDAC6-207ENST00000430858 PURAQ00577 322 aaKnown RBP11.3□□□□□ -0.6
HDAC6-207ENST00000430858 APOBRQ0VD83 1088 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 FUT2Q10981 343 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 XRRA1Q6P2D8 792 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 USP17L6PQ6QN14 398 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 HEATR3Q7Z4Q2 680 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 TEX2Q8IWB9 1127 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 FAM126BQ8IXS8 530 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 TDHQ8IZJ6 230 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 ZNF713Q8N859 430 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-207ENST00000430858 MTG1Q9BT17 334 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-207ENST00000430858 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
HDAC6-207ENST00000430858 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
HDAC6-207ENST00000430858 NID2Q14112 1375 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 CEP290O15078 2479 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 RGS20O76081 388 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 MYL3P08590 195 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 RAG1P15918 1043 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
HDAC6-207ENST00000430858 EVCP57679 992 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 ARHGAP1Q07960 439 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 GNPTABQ3T906 1256 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 PPP1R18Q6NYC8 613 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 IL31RAQ8NI17 732 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
HDAC6-207ENST00000430858 BADQ92934 168 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 EMID1Q96A84 441 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-207ENST00000430858 V9GY48 417 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-207ENST00000430858 GRIN2DO15399 1336 aa11.29□□□□□ -0.6
HDAC6-207ENST00000430858 SPDYE3A6NKU9 549 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 CD4P01730 458 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 MMP3P08254 477 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 ICAM3P32942 547 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 NAPAP54920 295 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 PSMC6P62333 389 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 PCNX4Q63HM2 1172 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 DHX37Q8IY37 1157 aaKnown RBP11.28□□□□□ -0.6
HDAC6-207ENST00000430858 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 INPP4AQ96PE3 977 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-207ENST00000430858 GLT8D2Q9H1C3 349 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 BARHL2Q9NY43 387 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
HDAC6-207ENST00000430858 FIBPO43427 364 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 SLC34A2O95436 690 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 TIMP1P01033 207 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 SUPT20HL2P0C7V6 817 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 ITGB8P26012 769 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 PDIA3P30101 505 aaKnown RBP11.27□□□□□ -0.61
HDAC6-207ENST00000430858 ANAPC15P60006 121 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 MRPS9P82933 396 aaKnown RBP11.27□□□□□ -0.61
HDAC6-207ENST00000430858 TOB2Q14106 344 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-207ENST00000430858 DGKDQ16760 1214 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 UBE2SQ16763 222 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 PFKFB3Q16875 520 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-207ENST00000430858 LRIT3Q3SXY7 679 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.61
HDAC6-207ENST00000430858 NFRKBQ6P4R8 1299 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 NLRX1Q86UT6 975 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 UPF3BQ9BZI7 483 aaKnown RBP11.27□□□□□ -0.61
HDAC6-207ENST00000430858 ALDH8A1Q9H2A2 487 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-207ENST00000430858 EHMT1Q9H9B1 1298 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 RIC8AQ9NPQ8 531 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
HDAC6-207ENST00000430858 SMCO2A6NFE2 343 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 STXBP3O00186 592 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 PRPF3O43395 683 aaKnown RBP11.26□□□□□ -0.61
HDAC6-207ENST00000430858 B4GALT4O60513 344 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 PPFIA4O75335 1185 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms