RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 USP17L12C9JPN9 530 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 USP17L21D6R901 530 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 TBX10O75333 385 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 PDE6AP16499 860 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 GTF2F1P35269 517 aaKnown RBP eCLIP11.87□□□□□ -0.512e-8■■■■■ 34.1
ATG4B-212ENST00000430617 GPM6BQ13491 265 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 C12orf60Q5U649 245 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 LRRC8DQ7L1W4 858 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-212ENST00000430617 AFAP1L1Q8TED9 768 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 ASIC4Q96FT7 647 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 ARMT1Q9H993 441 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 INSL6Q9Y581 213 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 LAMA4Q16363 1823 aa11.87□□□□□ -0.51
ATG4B-212ENST00000430617 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 A0A0D9SFI3 127 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 TCRBV5S4A2TA0A5A2 114 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 HIP1O00291 1037 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 LINC01565O15544 149 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 SGSM2O43147 1006 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 CHGBP05060 677 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 SELPP16109 830 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 CPT1AP50416 773 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 OAZ1P54368 228 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 HTRA4P83105 476 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-212ENST00000430617 HYAL1Q12794 435 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 SMAD4Q13485 552 aaKnown RBP11.86□□□□□ -0.51
ATG4B-212ENST00000430617 PTGISQ16647 500 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 SLFNL1Q499Z3 407 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 WDR11Q9BZH6 1224 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 IRF2BPLQ9H1B7 796 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 DIAPH3Q9NSV4 1193 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 NOD1Q9Y239 953 aa11.86□□□□□ -0.51
ATG4B-212ENST00000430617 CTDP1Q9Y5B0 961 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-212ENST00000430617 EP300Q09472 2414 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-212ENST00000430617 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 LOC730098B7Z3J9 87 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 PDGFBP01127 241 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 NBL1P41271 181 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 CHMP4BP1P59074 171 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 PTPN11Q06124 597 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 NMIQ13287 307 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 IKBKEQ14164 716 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 TTF1Q15361 905 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 MUM1L1Q5H9M0 696 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 GDF6Q6KF10 455 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 CAGE1Q8TC20 777 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 MORC4Q8TE76 937 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
ATG4B-212ENST00000430617 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-212ENST00000430617 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 CKBP12277 381 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 TMED8Q6PL24 325 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-212ENST00000430617 TRAF7Q6Q0C0 670 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 TMEM192Q8IY95 271 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 COPS5Q92905 334 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 TBC1D32Q96NH3 1257 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 CYP39A1Q9NYL5 469 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 FEM1BQ9UK73 627 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 ACACBO00763 2458 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 CHD6Q8TD26 2715 aa11.84□□□□□ -0.51
ATG4B-212ENST00000430617 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
ATG4B-212ENST00000430617 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-212ENST00000430617 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
ATG4B-212ENST00000430617 LGR5O75473 907 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 ADD2P35612 726 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 RBL2Q08999 1139 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 CWC27Q6UX04 472 aaKnown RBP11.83□□□□□ -0.52
ATG4B-212ENST00000430617 FBXO11Q86XK2 927 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 ADSSL1Q8N142 457 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 CCDC155Q8N6L0 562 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 WNT8BQ93098 351 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 CNTNAP3BQ96NU0 1288 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 SAMD11Q96NU1 681 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 CNTNAP3Q9BZ76 1288 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 ATP8A2Q9NTI2 1148 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 CD207Q9UJ71 328 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 CEP250Q9BV73 2442 aa11.83□□□□□ -0.52
ATG4B-212ENST00000430617 MYH6P13533 1939 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 A6NJR5 290 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 GRM6O15303 877 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
ATG4B-212ENST00000430617 EPB41L2O43491 1005 aaKnown RBP11.82□□□□□ -0.52
ATG4B-212ENST00000430617 NCK2O43639 380 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 EFCAB14O75071 495 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 KDM4AO75164 1064 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 327.3 ms