RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 AMNQ9BXJ7 453 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 BCAS3Q9H6U6 928 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 YBX2Q9Y2T7 364 aaKnown RBP13.71□□□□□ -0.21
HDAC4-202ENST00000430200 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.21
HDAC4-202ENST00000430200 TELO2Q9Y4R8 837 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 FRMPD4Q14CM0 1322 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 SLC27A2O14975 620 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 NR3C2P08235 984 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 ZNF286BP0CG31 522 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 RXRAP19793 462 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 TTLL4Q14679 1199 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 WTAPQ15007 396 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 TMEM67Q5HYA8 995 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-202ENST00000430200 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 RALYLQ86SE5 291 aaKnown RBP13.7□□□□□ -0.22
HDAC4-202ENST00000430200 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 NCOA7Q8NI08 942 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 WNT8BQ93098 351 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 DDX41Q9UJV9 622 aaKnown RBP13.7□□□□□ -0.22
HDAC4-202ENST00000430200 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
HDAC4-202ENST00000430200 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-202ENST00000430200 NKRFO15226 690 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC4-202ENST00000430200 ZEB2O60315 1214 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 SP2Q02086 613 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 TRDNQ13061 729 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 GPNMBQ14956 572 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 PGM5Q15124 567 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 ARHGEF16Q5VV41 709 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 GDF6Q6KF10 455 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-202ENST00000430200 ZNF654Q8IZM8 581 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
HDAC4-202ENST00000430200 HERVK_113Q902F9 699 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 TTC28Q96AY4 2481 aa13.69□□□□□ -0.22
HDAC4-202ENST00000430200 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-202ENST00000430200 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-202ENST00000430200 PRC1O43663 620 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 ARHGEF15O94989 841 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 GH1P01241 217 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 MYOGP15173 224 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
HDAC4-202ENST00000430200 RABGGTBP53611 331 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 CHMP4BP1P59074 171 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 STXBP2Q15833 593 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 MCF2L2Q86YR7 1114 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 MAFAQ8NHW3 353 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-202ENST00000430200 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 KIAA1671Q9BY89 1806 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 KAT6AQ92794 2004 aa13.68□□□□□ -0.22
HDAC4-202ENST00000430200 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 hCG_1642624A0A1W2PR95 340 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 F2P00734 622 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 MYCLP12524 364 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-202ENST00000430200 HOXD8P13378 290 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-202ENST00000430200 FOSL2P15408 326 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 MRPS9P82933 396 aaKnown RBP13.67□□□□□ -0.22
HDAC4-202ENST00000430200 NECTIN1Q15223 517 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 HSDL1Q3SXM5 330 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 CREB3L3Q68CJ9 461 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 NFRKBQ6P4R8 1299 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 DEFB128Q7Z7B8 93 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC4-202ENST00000430200 SRBD1Q8N5C6 995 aaKnown RBP13.67□□□□□ -0.22
HDAC4-202ENST00000430200 EMID1Q96A84 441 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-202ENST00000430200 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 NKX2-4Q9H2Z4 354 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 ZNF576Q9H609 170 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
HDAC4-202ENST00000430200 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 HAS3O00219 553 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 EIF3JO75822 258 aaKnown RBP13.66□□□□□ -0.22
HDAC4-202ENST00000430200 ADGRE1Q14246 886 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 VSIG10LQ86VR7 867 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
HDAC4-202ENST00000430200 SPZ1Q9BXG8 430 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 MAF1Q9H063 256 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 PRDM12Q9H4Q4 367 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
HDAC4-202ENST00000430200 PRRC2BQ5JSZ5 2229 aaKnown RBP13.66□□□□□ -0.22
HDAC4-202ENST00000430200 ERICH2A1L162 156 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 DLL1O00548 723 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 DDAH1O94760 285 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 GGPS1O95749 300 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 FGBP02675 491 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-202ENST00000430200 MBTPS1Q14703 1052 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
HDAC4-202ENST00000430200 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms