RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 GUCY2DQ02846 1103 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 SMYD4Q8IYR2 804 aaPredicted RBP16.74■□□□□ 0.27
PTPRF-206ENST00000429895 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 LMCD1Q9NZU5 365 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 NVLO15381 856 aaKnown RBP16.74■□□□□ 0.27
PTPRF-206ENST00000429895 SCARA5Q6ZMJ2 495 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 LARP4BQ92615 738 aaKnown RBP16.74■□□□□ 0.27
PTPRF-206ENST00000429895 RPGRIP1Q96KN7 1286 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 ACCSQ96QU6 501 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 PIGSQ96S52 555 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 COA7Q96BR5 231 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 CAPN7Q9Y6W3 813 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 CD58P19256 250 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 MX2P20592 715 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 EEF1GP26641 437 aaKnown RBP16.74■□□□□ 0.27
PTPRF-206ENST00000429895 PSMC2P35998 433 aaKnown RBP16.74■□□□□ 0.27
PTPRF-206ENST00000429895 INPP1P49441 399 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 SPATA1Q5VX52 437 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 CDC26Q8NHZ8 85 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 MICAL1Q8TDZ2 1067 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 ALKBH8Q96BT7 664 aaKnown RBP16.74■□□□□ 0.27
PTPRF-206ENST00000429895 SLC12A6Q9UHW9 1150 aa16.74■□□□□ 0.27
PTPRF-206ENST00000429895 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 SPECC1L-ADORA2AF8WAN1 911 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 PNMA2Q9UL42 364 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 SEMA3EO15041 775 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 CDR2Q01850 454 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 NACC1Q96RE7 527 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 MRPL46Q9H2W6 279 aaKnown RBP16.73■□□□□ 0.27
PTPRF-206ENST00000429895 KRT1P04264 644 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 SUPT20HL1Q3ZLR7 823 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 ASPRV1Q53RT3 343 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 ADD3Q9UEY8 706 aaKnown RBP16.73■□□□□ 0.27
PTPRF-206ENST00000429895 STK25O00506 426 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 ENC1O14682 589 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 CPP00450 1065 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 PHLDB3Q6NSJ2 640 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 PSPC1Q8WXF1 523 aaKnown RBP16.73■□□□□ 0.27
PTPRF-206ENST00000429895 SPATA17Q96L03 361 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 TLR7Q9NYK1 1049 aaKnown RBP16.73■□□□□ 0.27
PTPRF-206ENST00000429895 PDE8BO95263 885 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 ZNF449Q6P9G9 518 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 BBOF1Q8ND07 529 aa16.73■□□□□ 0.27
PTPRF-206ENST00000429895 BRD1O95696 1058 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 BPIFB4P59827 614 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 WHAMMQ8TF30 809 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 RIPOR2Q9Y4F9 1068 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 SART1O43290 800 aaKnown RBP16.72■□□□□ 0.27
PTPRF-206ENST00000429895 IRX4P78413 519 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 FAM186BQ8IYM0 893 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 MAGOHBQ96A72 148 aaKnown RBP16.72■□□□□ 0.27
PTPRF-206ENST00000429895 TUBGCP2Q9BSJ2 902 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 OR6B2Q6IFH4 312 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 CACTINQ8WUQ7 758 aaKnown RBP16.72■□□□□ 0.27
PTPRF-206ENST00000429895 TTC4O95801 387 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 CASP14P31944 242 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 POLIQ9UNA4 740 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 MAPKBP1O60336 1514 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 GNGT2O14610 69 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 AFPP02771 609 aaKnown RBP16.72■□□□□ 0.27
PTPRF-206ENST00000429895 IFNAR2P48551 515 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 THOC5Q13769 683 aaKnown RBP16.72■□□□□ 0.27
PTPRF-206ENST00000429895 PPP2R5EQ16537 467 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 KCTD16Q68DU8 428 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 PPP4R4Q6NUP7 873 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 TBCKQ8TEA7 893 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 IFT122Q9HBG6 1241 aa16.72■□□□□ 0.27
PTPRF-206ENST00000429895 ANXA13P27216 316 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 UBE2SQ16763 222 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 DARS2Q6PI48 645 aaKnown RBP16.71■□□□□ 0.27
PTPRF-206ENST00000429895 KCTD6Q8NC69 237 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 SSH3Q8TE77 659 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 CFAP36Q96G28 342 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 SRGAP2CP0DJJ0 459 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 DDIT3P35638 169 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 STAT2P52630 851 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
PTPRF-206ENST00000429895 MYL3P08590 195 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 BRD3Q15059 726 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
PTPRF-206ENST00000429895 CAPS2Q9BXY5 557 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 MTMR6Q9Y217 621 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 LEMD3Q9Y2U8 911 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 TCP1P17987 556 aaKnown RBP16.71■□□□□ 0.27
PTPRF-206ENST00000429895 STX1BP61266 288 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.27
PTPRF-206ENST00000429895 ARHGEF18Q6ZSZ5 1173 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 CCDC17Q96LX7 622 aa16.71■□□□□ 0.27
PTPRF-206ENST00000429895 GPR101Q96P66 508 aaPredicted RBP16.71■□□□□ 0.27
PTPRF-206ENST00000429895 RRAGDQ9NQL2 400 aaPredicted RBP16.71■□□□□ 0.27
PTPRF-206ENST00000429895 WDR17Q8IZU2 1322 aa16.71■□□□□ 0.26
PTPRF-206ENST00000429895 PRKAB2O43741 272 aa16.71■□□□□ 0.26
PTPRF-206ENST00000429895 EPHB1P54762 984 aa16.71■□□□□ 0.26
PTPRF-206ENST00000429895 PROSER3Q2NL68 480 aa16.71■□□□□ 0.26
PTPRF-206ENST00000429895 CALN1Q9BXU9 219 aa16.71■□□□□ 0.26
PTPRF-206ENST00000429895 TRPC5Q9UL62 973 aaPredicted RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms