RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 STKLD1Q8NE28 680 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 TBC1D5Q92609 795 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 MAGEA13PA6NCF6 341 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 IRGCQ6NXR0 463 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 DTHD1Q6ZMT9 781 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 RNF217Q8TC41 542 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 RSPH1Q8WYR4 309 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 TSC22D4Q9Y3Q8 395 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 CALB2P22676 271 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 OCA2Q04671 838 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 TUBA3EQ6PEY2 450 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 CADPS2Q86UW7 1296 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 CCDC138Q96M89 665 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 KIDINS220Q9ULH0 1771 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 ATN1P54259 1190 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 CCDC14Q49A88 953 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 XPO6Q96QU8 1125 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 SERPINI1Q99574 410 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 SLC4A4Q9Y6R1 1079 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 CARMIL3Q8ND23 1372 aa8.18□□□□□ -1.1
SYNPO2-202ENST00000429713 DCAF8L1A6NGE4 600 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 HDAC4P56524 1084 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 AP2B1P63010 937 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 ATL2Q8NHH9 583 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 GRK7Q8WTQ7 553 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 GSDMAQ96QA5 445 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 PITPNM2Q9BZ72 1349 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 NVLO15381 856 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 KRT75O95678 551 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 BYSLQ13895 437 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 NLRP14Q86W24 1093 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 DHTKD1Q96HY7 919 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 ATAD3AQ9NVI7 634 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TBCCD1Q9NVR7 557 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 STAP2Q9UGK3 403 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 MKL2Q9ULH7 1088 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 VWA3AA6NCI4 1184 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TNFRSF8P28908 595 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 STX2P32856 288 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 NDUFA8P51970 172 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 OLR1P78380 273 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 CDR2Q01850 454 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 PTH1RQ03431 593 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 CYB5D1Q6P9G0 228 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 RBM43Q6ZSC3 357 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TRIM74Q86UV6 250 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TRIM73Q86UV7 250 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 DCLRE1BQ9H816 532 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 NEURL4Q96JN8 1562 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 HGSO14964 777 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 HOXB7P09629 217 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 MYBL2P10244 700 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TPP2P29144 1249 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 PNOCQ13519 176 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 ARHGEF2Q92974 986 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 MPP4Q96JB8 637 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 INTUQ9ULD6 942 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 H3BNX3 289 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TBC1D8O95759 1140 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 ADKP55263 362 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 GRIN1Q05586 938 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 SLC9C1Q4G0N8 1177 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 ANKRD35Q8N283 1001 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 FUT8Q9BYC5 575 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 LSG1Q9H089 658 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 CABP5Q9NP86 173 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 SQORQ9Y6N5 450 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TNKSO95271 1327 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 XPOTO43592 962 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 IRAK1P51617 712 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 SLC39A6Q13433 755 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 C11orf91Q3C1V1 193 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 POTEAQ6S8J7 498 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 CCT8L2Q96SF2 557 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 UBAP1Q9NZ09 502 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 RTEL1Q9NZ71 1219 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 SCAF8Q9UPN6 1271 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 DEPDC5O75140 1603 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 DEAF1O75398 565 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 BAG3O95817 575 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TRIM68Q6AZZ1 485 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 ANO5Q75V66 913 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 SIRT2Q8IXJ6 389 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 USP44Q9H0E7 712 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 FAM25AB3EWG3 89 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 FAM25CB3EWG5 89 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 FAM25GB3EWG6 89 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 C4BPBP20851 252 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 CTCFP49711 727 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 CEBPAP49715 358 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 LBRQ14739 615 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 NAIF1Q69YI7 327 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 CERS3Q8IU89 383 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 PPP1R14CQ8TAE6 165 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 TTC1Q99614 292 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 GORASP1Q9BQQ3 440 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms