RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TSPYL1Q9H0U9 437 aa9.74□□□□□ -0.85
GABPB1-205ENST00000429662 LZTFL1Q9NQ48 299 aa9.74□□□□□ -0.85
GABPB1-205ENST00000429662 DISC1Q9NRI5 854 aa9.74□□□□□ -0.85
GABPB1-205ENST00000429662 ZNHIT6Q9NWK9 470 aaKnown RBP9.74□□□□□ -0.85
GABPB1-205ENST00000429662 CWC15Q9P013 229 aaKnown RBP9.74□□□□□ -0.85
GABPB1-205ENST00000429662 CAPN11Q9UMQ6 739 aa9.74□□□□□ -0.85
GABPB1-205ENST00000429662 LUC7L2Q9Y383 392 aaKnown RBP9.74□□□□□ -0.85
GABPB1-205ENST00000429662 EPN1Q9Y6I3 576 aaPredicted RBP9.74□□□□□ -0.85
GABPB1-205ENST00000429662 TAF1P21675 1872 aa9.74□□□□□ -0.85
GABPB1-205ENST00000429662 SCN9AQ15858 1988 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 PSMD14O00487 310 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 FGFR1OPO95684 399 aaKnown RBP9.73□□□□□ -0.85
GABPB1-205ENST00000429662 BAG3O95817 575 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 EGFRP00533 1210 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 LDHCP07864 332 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 PARP1P09874 1014 aaKnown RBP9.73□□□□□ -0.85
GABPB1-205ENST00000429662 CYLC1P35663 651 aaPredicted RBP9.73□□□□□ -0.85
GABPB1-205ENST00000429662 UBA7P41226 1012 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 GMPSP49915 693 aaPredicted RBP9.73□□□□□ -0.85
GABPB1-205ENST00000429662 EIF6P56537 245 aaKnown RBP9.73□□□□□ -0.85
GABPB1-205ENST00000429662 CDK17Q00537 523 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 UBXN1Q04323 297 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 MAP9Q49MG5 647 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 FIGNQ5HY92 759 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 IQCEQ6IPM2 695 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 WDR93Q6P2C0 686 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 KRT25Q7Z3Z0 450 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 CCDC170Q8IYT3 715 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 SLC35F6Q8N357 371 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 GIMAP8Q8ND71 665 aaPredicted RBP9.73□□□□□ -0.85
GABPB1-205ENST00000429662 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 ZC3H15Q8WU90 426 aaKnown RBP9.73□□□□□ -0.85
GABPB1-205ENST00000429662 JDP2Q8WYK2 163 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 RUBCNQ92622 972 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 DNAJC7Q99615 494 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 TSGA10Q9BZW7 698 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 MYO6Q9UM54 1294 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 COL4A1P02462 1669 aa9.73□□□□□ -0.85
GABPB1-205ENST00000429662 ROBO3Q96MS0 1386 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 PRUNE2Q8WUY3 3088 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 COL1A1P02452 1464 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 A0A1W2PQJ5 194 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 hCG_1984214I3L0E3 225 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 M0R2N6 131 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 SEC31AO94979 1220 aaKnown RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 NDUFA10O95299 355 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 IPO7O95373 1038 aaKnown RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 GNA11P29992 359 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 HOXA10P31260 410 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 CCT6AP40227 531 aaKnown RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 PRCPP42785 496 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 ERVK-24P63145 666 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 PTPN21Q16825 1174 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 MUM1L1Q5H9M0 696 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 BEND6Q5SZJ8 279 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 C12orf60Q5U649 245 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 ZNF713Q8N859 430 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 ZNF296Q8WUU4 475 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 LRRC27Q9C0I9 530 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 VPS16Q9H269 839 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 BLZF1Q9H2G9 400 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 ANKZF1Q9H8Y5 726 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 VIPAS39Q9H9C1 493 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 ZNF408Q9H9D4 720 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 KBTBD4Q9NVX7 518 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 TAB2Q9NYJ8 693 aa9.72□□□□□ -0.85
GABPB1-205ENST00000429662 ZNF646O15015 1829 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 LAMA2P24043 3122 aaKnown RBP9.72□□□□□ -0.85
GABPB1-205ENST00000429662 CYP2D7A0A087X1C5 515 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 hCG_1642624A0A1W2PR95 340 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 ANO9A1A5B4 782 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 TARSL2A2RTX5 802 aaKnown RBP9.71□□□□□ -0.86
GABPB1-205ENST00000429662 KRT86O43790 486 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 SASH3O75995 380 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 CCNE1P24864 410 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 PPP4CP60510 307 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 TFAP4Q01664 338 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 DSG2Q14126 1118 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 IL17AQ16552 155 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 MEA1Q16626 185 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 RCSD1Q6JBY9 416 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 FOXR2Q6PJQ5 311 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 NBPF5PQ86XG9 351 aaPredicted RBP9.71□□□□□ -0.86
GABPB1-205ENST00000429662 DZIP1Q86YF9 867 aaKnown RBP9.71□□□□□ -0.86
GABPB1-205ENST00000429662 SMYD4Q8IYR2 804 aaPredicted RBP9.71□□□□□ -0.86
GABPB1-205ENST00000429662 ZNF444Q8N0Y2 327 aaPredicted RBP9.71□□□□□ -0.86
GABPB1-205ENST00000429662 RASSF8Q8NHQ8 419 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 ZNF507Q8TCN5 953 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 ZNF384Q8TF68 577 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 TRIM47Q96LD4 638 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 MTRQ99707 1265 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 C7orf25Q9BPX7 421 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 MED4Q9NPJ6 270 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 EXOC1Q9NV70 894 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 MCM9Q9NXL9 1143 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 BARHL2Q9NY43 387 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 PCDHA6Q9UN73 950 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms